Eric W. Deutsch

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

21.1Author DataRank

Indexed papers

20in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 20 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The ProteomeXchange consortium at 10 years: 2023 update

Nucleic Acids Research(2022)10.1093/nar/gkac1040

Top 4%

5.2DataRank

Top 4%876 citations

Nuno Bandeira, Yasset Perez-Riverol, Vagisha Sharma, Jeremy Carver, Luis Mendoza +17 more

Papers

Driven by 53 papers — median percentile 66. Top paper: “Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)”.

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Nature Biotechnology(2008)10.1038/nbt1391

N/A

6.5DataRank · unranked

114 citations

On behalf of the MGED Society, Jules J. Berman, G. Steven Bova, Ann-Christine Syvanen, Roger E. Bumgarner +40 more

The ProteomeXchange consortium at 10 years: 2023 update

Nucleic Acids Research(2022)10.1093/nar/gkac1040

Top 4%

5.2DataRank

Top 4%876 citations

Nuno Bandeira, Yasset Perez-Riverol, Vagisha Sharma, Jeremy Carver, Luis Mendoza +17 more

A high-stringency blueprint of the human proteome

Nature Communications(2020)10.1038/s41467-020-19045-9

Top 6%

3.9DataRank

Top 6%217 citations

Edouard C. Nice, Eric W. Deutsch, Lydie Lane, Gilbert S. Omenn, Stephen R. Pennington +41 more

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0

Top 7%

3.2DataRank

Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Data Management of Sensitive Human Proteomics Data: Current Practices, Recommendations, and Perspectives for the Future

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100071

Top 12%

1.8DataRank

Top 12%43 citations

Eric W. Deutsch, Oliver Kohlbacher, Lennart Martens, Juan Antonio Vizcaino, Nuno Bandeira

What Can Ribo-Seq, Immunopeptidomics, and Proteomics Tell Us About the Noncanonical Proteome?

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100631

N/A

1.8DataRank · unranked

92 citations

Jennifer G. Abelin, Leron W. Kok, Karl R. Clauser, Jonathan M. Mudge, Jorge Ruiz-Orera +5 more

The 2022 Report on the Human Proteome from the HUPO Human Proteome Project

Journal of Proteome Research(2022)10.1021/acs.jproteome.2c00498

Top 14%

1.5DataRank

Top 14%60 citations

Lydie Lane, Christopher M. Overall, Charles Pineau, Nicolle H. Packer, Ileana M. Cristea +13 more

Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work

Journal of Proteome Research(2023)10.1021/acs.jproteome.2c00637

N/A

1.3DataRank · unranked

59 citations

Juan Antonio Vizcaino, Andrew R. Jones, Pierre‐Alain Binz, Henry Lam, Joshua Klein +24 more

Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project

Journal of Proteome Research(2021)10.1021/acs.jproteome.1c00590

Top 16%

1.3DataRank

Top 16%44 citations

Lydie Lane, Christopher M. Overall, Young‐Ki Paik, Ileana M. Cristea, Fernando J. Corrales +11 more

The 2023 Report on the Proteome from the HUPO Human Proteome Project

Journal of Proteome Research(2024)10.1021/acs.jproteome.3c00591

Top 19%

1.1DataRank

Top 19%28 citations

Lydie Lane, Christopher M. Overall, Cecilia Lindskog, Charles Pineau, Nicolle H. Packer +13 more

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

Nature Biotechnology(2008)10.1038/nbt.1411

N/A

0.950DataRank · unranked

561 citations

Dawn Field, Jan Aerts, Rolf Apweiler, Michael Ashburner, On behalf of the MGED Society +63 more

ProteomicsML: An Online Platform for Community-Curated Data sets and Tutorials for Machine Learning in Proteomics

Journal of Proteome Research(2023)10.1021/acs.jproteome.2c00629

Top 28%

0.710DataRank

Top 28%27 citations

Ralf Gabriels, Robbin Bouwmeester, Siegfried Gessulat, Benjamin A. Neely, Magnus Palmblad +5 more

Metrics for the Human Proteome Project 2015: Progress on the Human Proteome and Guidelines for High-Confidence Protein Identification

Journal of Proteome Research(2015)10.1021/acs.jproteome.5b00499

N/A

0.680DataRank · unranked

92 citations

Lydie Lane, Emma K. Lundberg, Ronald C. Beavis, Alexey I. Nesvizhskii, Eric W. Deutsch +1 more

The Circulating Proteome─Technological Developments, Current Challenges, and Future Trends

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00586

N/A

0.596DataRank · unranked

52 citations

Daniel Hornburg, Maria Pernemalm, Stefanie M. Hauck, Krishnan K. Palaniappan, Vincent Albrecht +13 more

The 2024 Report on the Human Proteome from the HUPO Human Proteome Project

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00776

Top 34%

0.585DataRank

Top 34%26 citations

Sandra Orchard, Lydie Lane, Cecilia Lindskog, Charles Pineau, Christopher M. Overall +15 more

The ProteomeXchange consortium in 2026: making proteomics data FAIR

Nucleic Acids Research(2025)10.1093/nar/gkaf1146

Top 35%

0.568DataRank

Top 35%33 citations

Nuno Bandeira, Yasset Perez-Riverol, Vagisha Sharma, Jeremy Carver, Luis Mendoza +15 more

Omics Discovery Index - Discovering and Linking Public ‘Omics’ Datasets

bioRxiv (Cold Spring Harbor Laboratory)(2016)10.1101/049205

Top 35%

0.563DataRank

Top 35%12 citations

Mingze Bai, Felipe da Veiga Leprevost, Silvano Squizzato, Young Mi Park, Kenneth Haug +25 more

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.09.612016

N/A

0.542DataRank · unranked

36 citations

Leron W. Kok, Jonathan M. Mudge, Jorge Ruiz-Orera, Ivo Fierro-Monti, Zhi Sun +38 more

Announcing the Biomedical Data Translator: Initial Public Release

Clinical and Translational Science(2025)10.1111/cts.70284

N/A

0.397DataRank · unranked

9 citations

Gustavo Glusman, Sergio E. Baranzini, Chris Bizon, Matthew Brush, William E. Byrd +37 more

An expanded reference catalog of translated open reading frames for biomedical research

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.03.662928

Top 53%

0.319DataRank

Top 53%7 citations

Jorge Ruiz-Orera, Jack A. S. Tierney, Jim Clauwaert, Eric W. Deutsch, M. Mar Albà +41 more

BioHackathon 2015: Semantics of data for life sciences and reproducible research

F1000Research(2020)10.12688/f1000research.18236.1

N/A

0.292DataRank · unranked

6 citations

Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim +72 more

The Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work

ChemRxiv(2022)10.26434/chemrxiv-2022-ksqg1

N/A

0.291DataRank · unranked

5 citations

Juan Antonio Vizcaino, Andrew R. Jones, Pierre‐Alain Binz, Henry Lam, Joshua Klein +24 more

ProteomicsML: An Online Platform for Community-Curated Datasets and Tutorials for Machine Learning in Proteomics

ChemRxiv(2022)10.26434/chemrxiv-2022-2s6kx

Top 65%

0.208DataRank

Top 65%3 citations

Ralf Gabriels, Robbin Bouwmeester, Siegfried Gessulat, Benjamin A. Neely, Magnus Palmblad +5 more

Candida albicans : A Comprehensive View of the Proteome

Journal of Proteome Research(2025)10.1021/acs.jproteome.4c01020

Top 70%

0.165DataRank

Top 70%2 citations

Samuel de la Cámara Fuentes, Zhi Sun, María Luisa Hernáez, Ana Borrajo, Aída Pitarch +6 more

Proteomics Standards Initiative Extended FASTA Format (PEFF)

10.1101/624494

N/A

0.165DataRank · unranked

2 citations

Jim Shofstahl, Juan Antonio Vizcaino, Harald Barsnes, Robert J. Chalkley, Gerben Menschaert +16 more

The PanOryza pangene catalog of Asian cultivated rice

Genome Research(2025)10.1101/gr.280790.125

Top 78%

0.104DataRank

Top 78%1 citations

Eshan Sharma, Shradha Saraf, Guy Naamati, Parul Gupta, Justin Elser +24 more

Evaluation of PE5 entries on the Human Proteome Project Target List

ChemRxiv(2025)10.26434/chemrxiv-2025-jpdvx

Top 100%

0DataRank

Top 100%0 citations

Marie Andken, Jonathan M. Mudge, Michele Magrane, Sandra Orchard, Zhi Sun +2 more

mzPeak: Designing a Scalable, Interoperable, and Future-Ready Mass Spectrometry Data Format

Journal of Proteome Research(2025)10.1021/acs.jproteome.5c00435

N/A

0DataRank · unranked

3 citations

Theodore Alexandrov, Aivett Bilbao Pena, Wout Bittremieux, Federico Iván Brigante, Matthew Chambers +26 more

Announcing the Biomedical Data Translator: Initial Public Release

UNC Libraries(2025)10.17615/9as8-h722

N/A

0DataRank · unranked

0 citations

Gustavo Glusman, Sergio E. Baranzini, Chris Bizon, Matthew Brush, William E. Byrd +37 more

mzMLb: A Future-Proof Raw Mass Spectrometry Data Format Based on Standards-Compliant mzML and Optimized for Speed and Storage Requirements

Journal of Proteome Research(2020)10.1021/acs.jproteome.0c00192

N/A

0DataRank · unranked

31 citations

Andris Jankevics, Eric W. Deutsch, Andrew R. Jones, Andrew W. Dowsey, Ranjeet Bhamber

Universal Spectrum Identifier for mass spectra

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.07.415539

N/A

0DataRank · unranked

12 citations

Yasset Perez-Riverol, Jeremy Carver, Shin Kawano, Luis Mendoza, Tim Van Den Bossche +13 more

mzMLb: a future-proof raw mass spectrometry data format based on standards-compliant mzML and optimized for speed and storage requirements

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.13.947218

N/A

0DataRank · unranked

7 citations

Andris Jankevics, Eric W. Deutsch, Andrew R. Jones, Andrew W. Dowsey, Ranjeet Bhamber

Advances and Utility of the Human Plasma Proteome

Journal of Proteome Research(2021)10.1021/acs.jproteome.1c00657

N/A

0DataRank · unranked

251 citations

Gilbert S. Omenn, Zhi Sun, Michal Maes, Maria Pernemalm, Krishnan K. Palaniappan +10 more

Universal Spectrum Identifier for mass spectra

Nature Methods(2021)10.1038/s41592-021-01184-6

N/A

0DataRank · unranked

104 citations

Yasset Perez-Riverol, Jeremy Carver, Shin Kawano, Luis Mendoza, Tim Van Den Bossche +13 more

A wide-ranging Pseudomonas aeruginosa PeptideAtlas build: A useful proteomic resource for a versatile pathogen

Journal of Proteomics(2021)10.1016/j.jprot.2021.104192

N/A

0DataRank · unranked

15 citations

Zhi Sun, Victoria Mascaraque, Enrique Pérez, Vital Vialás, Eric W. Deutsch +5 more

A method for independent estimation of false localisation rate for phosphoproteomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.18.464791

N/A

0DataRank · unranked

1 citations

Ananth Prakash, Yasset Perez-Riverol, Oscar M. Camacho, María Martin, Juan Antonio Vizcaino +3 more

Profiling the Human Phosphoproteome to Estimate the True Extent of Protein Phosphorylation

Journal of Proteome Research(2022)10.1021/acs.jproteome.2c00131

N/A

0DataRank · unranked

46 citations

Patrick A. Eyers, Claire E. Eyers, Emily Bowler-Barnett, María Martin, Zhi Sun +3 more

Is DIA proteomics data FAIR? Current data sharing practices, available bioinformatics infrastructure and recommendations for the future

PROTEOMICS(2022)10.1002/pmic.202200014

N/A

0DataRank · unranked

13 citations

Eric W. Deutsch, Juan Antonio Vizcaino, Andrew R. Jones

The Trans-Proteomic Pipeline: Robust Mass Spectrometry-based Proteomics Data Analysis Suite

ChemRxiv(2022)10.26434/chemrxiv-2022-3c75n

N/A

0DataRank · unranked

6 citations

Luis Mendoza, David Shteynberg, Michael R. Hoopmann, Zhi Sun, Jimmy K. Eng +2 more

ARAX: a graph-based modular reasoning tool for translational biomedicine

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.12.503810

N/A

0DataRank · unranked

3 citations

Chunyu Ma, Luis Mendoza, Finn Womack, E. C. Wood, Meghamala Sinha +10 more

Proteomics Standards Initiative’s ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms

Journal of Proteome Research(2022)10.1021/acs.jproteome.1c00771

N/A

0DataRank · unranked

0 citations

Eric W. Deutsch, Pierre‐Alain Binz, Ryan T. Fellers, Anthony J. Cesnik, Joshua Klein +13 more

Evolutionary origins and interactomes of human, young microproteins and small peptides translated from short open reading frames

Molecular Cell(2023)10.1016/j.molcel.2023.01.023

N/A

0DataRank · unranked

161 citations

Jana Felicitas Schulz, Jorge Ruiz-Orera, Marieluise Kirchner, Matthias Ziehm, Eleonora Adami +18 more

Trans-Proteomic Pipeline: Robust Mass Spectrometry-Based Proteomics Data Analysis Suite

Journal of Proteome Research(2023)10.1021/acs.jproteome.2c00624

N/A

0DataRank · unranked

114 citations

Luis Mendoza, David Shteynberg, Michael R. Hoopmann, Zhi Sun, Jimmy K. Eng +2 more

Proteomic changes induced by longevity-promoting interventions in mice

GeroScience(2023)10.1007/s11357-023-00917-z

N/A

0DataRank · unranked

14 citations

Jack Wiedrick, Alicia Feryn, Michal Maes, Mukul K. Midha, David Baxter +13 more

ARAX: a graph-based modular reasoning tool for translational biomedicine

Bioinformatics(2023)10.1093/bioinformatics/btad082

N/A

0DataRank · unranked

6 citations

Chunyu Ma, Luis Mendoza, Finn Womack, E. C. Wood, Meghamala Sinha +10 more

What can Ribo-seq and proteomics tell us about the non-canonical proteome?

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.16.541049

N/A

0DataRank · unranked

9 citations

Jennifer G. Abelin, Leron W. Kok, Karl R. Clauser, Jonathan M. Mudge, Jorge Ruiz-Orera +4 more

Phosphorylation in the Plasmodium falciparum proteome: A meta-analysis of publicly available data sets

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.20.567785

N/A

0DataRank · unranked

1 citations

Kerry A. Ramsbottom, Ananth Prakash, Zhi Sun, Yasset Perez-Riverol, Emily Bowler-Barnett +6 more

A meta-analysis of rice phosphoproteomics data to understand variation in cell signalling across the rice pan-genome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.17.567512

Top 100%

0DataRank

Top 100%0 citations

Ananth Prakash, Yasset Perez-Riverol, Oscar M. Camacho, Zhi Sun, Deepti J Kundu +9 more

Phosphorylation in the Plasmodium falciparum Proteome: A Meta-Analysis of Publicly Available Data Sets

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00418

N/A

0DataRank · unranked

4 citations

Kerry A. Ramsbottom, Ananth Prakash, Zhi Sun, Yasset Perez-Riverol, Emily Bowler-Barnett +6 more

SpectiCal: m/z Calibration of MS2 Peptide Spectra Using Known Low Mass Ions

Journal of Proteome Research(2024)10.1021/acs.jproteome.3c00882

N/A

0DataRank · unranked

1 citations

Eric W. Deutsch, Nathan H. Zhang

Candida albicans a comprehensive view of the proteome

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.20.629377

Top 100%

0DataRank

Top 100%0 citations

Samuel de la Cámara-Fuentes, Zhi Sun, María Luisa Hernáez, Ana Borrajo, Aída Pitarch +6 more

Quetzal: Comprehensive Peptide Fragmentation Annotation and Visualization

Journal of Proteome Research(2025)10.1021/acs.jproteome.5c00092

N/A

0DataRank · unranked

5 citations

Luis Mendoza, Robert L. Moritz, Eric W. Deutsch

PloverDB: a high-performance platform for serving biomedical knowledge graphs as standards-compliant web APIs

Bioinformatics(2025)10.1093/bioinformatics/btaf380

N/A

0DataRank · unranked

1 citations

Eric W. Deutsch, Stephen A. Ramsey, Amy K. Glen

Eric W. Deutsch

Indexed papers

Top data-sharing exemplar

Papers