Feixiong Cheng

Also affiliated with Duquesne University, Cleveland Clinic Lerner College of Medicine, Case Comprehensive Cancer Center, Case Western Reserve University

Biochemistry, Genetics and Molecular BiologyComputer ScienceMedicineNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

17.1Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

Cell(2018)10.1016/j.cell.2018.02.052

Top 2%

8.1DataRank

Top 2%3980 citations

Katherine A. Hoadley, Laila M. Poisson, Alexander J. Lazar, Andrew D. Cherniack, Albert J. Kovatich +866 more

Papers

Driven by 108 papers — median percentile 79. Top paper: “Artificial intelligence in COVID-19 drug repurposing”.

Artificial intelligence in COVID-19 drug repurposing

The Lancet Digital Health(2020)10.1016/s2589-7500(20)30192-8

N/A

9.8DataRank · unranked

643 citations

Fei Wang, Jian Tang, Ruth Nussinov, Feixiong Cheng, Yadi Zhou

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

Cell(2018)10.1016/j.cell.2018.02.052

Top 2%

8.1DataRank

Top 2%3980 citations

Katherine A. Hoadley, Laila M. Poisson, Alexander J. Lazar, Andrew D. Cherniack, Albert J. Kovatich +866 more

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

Cell(2018)10.1016/j.cell.2018.03.033

Top 3%

6.4DataRank

Top 3%447 citations

Matthew H. Bailey, Hoifung Poon, Vesteinn Thorsson, Antonio Colaprico, Andreas Bender +883 more

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas

Cell Reports(2018)10.1016/j.celrep.2018.03.046

N/A

5.5DataRank · unranked

186 citations

Francisco Sanchez-Vega, Konnor C. La, Joshua Armenia, Walid K. Chatila, Augustin Luna +869 more

Oncogenic Signaling Pathways in The Cancer Genome Atlas

Cell(2018)10.1016/j.cell.2018.03.035

N/A

1.2DataRank · unranked

3322 citations

Marco Mina, Joshua Armenia, Walid K. Chatila, Augustin Luna, Konnor C. La +891 more

Network-based drug repurposing for novel coronavirus 2019-nCoV/SARS-CoV-2

Cell Discovery(2020)10.1038/s41421-020-0153-3

N/A

1.1DataRank · unranked

1704 citations

Yuan Hou, Jiayu Shen, Yin Huang, William R. Martin, Feixiong Cheng +1 more

Biomedical discovery through the integrative biomedical knowledge hub (iBKH)

iScience(2023)10.1016/j.isci.2023.106460

Top 21%

0.966DataRank

Top 21%31 citations

Yu Hou, Manqi Zhou, Suraj Rajendran, Jacqueline R. M. A. Maasch, Zehra Abedi +14 more

Multimodal machine learning in precision health: A scoping review

npj Digital Medicine(2022)10.1038/s41746-022-00712-8

N/A

0.924DataRank · unranked

471 citations

Hanyin Wang, Yikuan Li, Saya R Dennis, Meghan R. Hutch, Zhenxing Xu +4 more

My personal mutanome: a computational genomic medicine platform for searching network perturbing alleles linking genotype to phenotype

Genome biology(2021)10.1186/s13059-021-02269-3

Top 25%

0.803DataRank

Top 25%22 citations

Junfei Zhao, Jiansong Fang, William R. Martin, Lang Li, Ruth Nussinov +4 more

SOAR elucidates disease mechanisms and empowers drug discovery through spatial transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.17.488596

Top 26%

0.773DataRank

Top 26%15 citations

Saya Dennis, Meghan R. Hutch, Yanyi Ding, Yadi Zhou, Yawei Li +9 more

Recent Advances in Systems and Network Medicine: Meeting Report from the First International Conference in Systems and Network Medicine

Systems Medicine(2020)10.1089/sysm.2020.0001

N/A

0.696DataRank · unranked

12 citations

Ancha Baranova, Pat Baird, Elia Brodsky, Atul Janardhan Butte, Amrita K. Cheema +45 more

Temporal Trends of Cardiac Outcomes and Impact on Survival in Patients With Cancer

The American Journal of Cardiology(2020)10.1016/j.amjcard.2020.09.030

N/A

0.450DataRank · unranked

8 citations

Yuan Hou, Chris Watson, Rohit Moudgil, Chirag Shah, Jame Abraham +21 more

In Silico Insights into Protein–Protein Interaction Disruptive Mutations in the PCSK9-LDLR Complex

International Journal of Molecular Sciences(2020)10.3390/ijms21051550

N/A

0DataRank · unranked

21 citations

Felice C. Lightstone, Feixiong Cheng, William R. Martin

Pharmacogenomics for immunotherapy and immune-related cardiotoxicity

Human Molecular Genetics(2020)10.1093/hmg/ddaa137

N/A

0DataRank · unranked

19 citations

Charis Eng, Feixiong Cheng, Jessica A. Castrillon

Phosphorylation of PLCγ1 by EphA2 Receptor Tyrosine Kinase Promotes Tumor Growth in Lung Cancer

Molecular Cancer Research(2020)10.1158/1541-7786.mcr-20-0075

N/A

0DataRank · unranked

18 citations

Laura C. Kim, Wei Han, Yuan Hou, Deanna N. Edwards, Shan Wang +5 more

A network-based deep learning methodology for stratification of tumor mutations

Bioinformatics(2020)10.1093/bioinformatics/btaa1099

N/A

0DataRank · unranked

27 citations

Zhen Han, Zi‐Ke Zhang, Ruth Nussinov, Feixiong Cheng, Chuang Liu

COVID-19 treatment: Combining anti-inflammatory and antiviral therapeutics using a network-based approach

Cleveland Clinic Journal of Medicine(2020)10.3949/ccjm.87a.ccc037

N/A

0DataRank · unranked

26 citations

Sujata Rao, Reena Mehra, Feixiong Cheng

Pharmacogenomics meets precision cardio-oncology: is there synergistic potential?

Human Molecular Genetics(2020)10.1093/hmg/ddaa134

N/A

0DataRank · unranked

3 citations

Jessica A. Castrillon, Feixiong Cheng, Jennifer Hockings

A Network Medicine Approach to Investigation and Population-based Validation of Disease Manifestations and Drug Repurposing for COVID-19

ChemRxiv(2020)10.26434/chemrxiv.12579137

N/A

0DataRank · unranked

30 citations

Yuan Hou, Jiayu Shen, Asha Kalianpur, Joe Zein, Daniel A. Culver +13 more

A Network Medicine Approach to Investigation and Population-based Validation of Disease Manifestations and Drug Repurposing for COVID-19

ChemRxiv(2020)10.26434/chemrxiv.12579137.v1

N/A

0DataRank · unranked

19 citations

Yuan Hou, Jiayu Shen, Asha Kalianpur, Joe Zein, Daniel A. Culver +13 more

Myeloid-derived suppressor cell subsets drive glioblastoma growth in a sex-specific manner

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.19.954552

N/A

0DataRank · unranked

16 citations

Yadi Zhou, Chihyun Park, Changjin Hong, Daniel Vail, Daniel J. Silver +18 more

Network-based Translation of GWAS Findings to Pathobiology and Drug Repurposing for Alzheimer’s Disease

medRxiv(2020)10.1101/2020.01.15.20017160

N/A

0DataRank · unranked

15 citations

Pengyue Zhang, Quan Wang, Yadi Zhou, Chien‐Wei Chiang, Rui Chen +8 more

Multimodal single-cell/nucleus RNA-sequencing data analysis uncovers molecular networks between disease-associated microglia and astrocytes with implications for drug repurposing in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.23.310466

N/A

0DataRank · unranked

13 citations

Pengyue Zhang, Yin Huang, Lynn M. Bekris, Justin D. Lathia, Chien‐Wei Chiang +6 more

A Rational Design of a Multi-Epitope Vaccine Against SARS-CoV-2 Which Accounts for the Glycan Shield of the Spike Glycoprotein

ChemRxiv(2020)10.26434/chemrxiv.12770225

N/A

0DataRank · unranked

8 citations

Feixiong Cheng, William R. Martin

Multimodal Single-Cell Omics Analysis of COVID-19 Sex Differences in Human Immune Systems

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.407007

N/A

0DataRank · unranked

1 citations

Yadi Zhou, Michaela U. Gack, Justin D. Lathia, Asha Kallianpur, Reena Mehra +6 more

A Rational Design of a Multi-Epitope Vaccine Against SARS-CoV-2 Which Accounts for the Glycan Shield of the Spike Glycoprotein

ChemRxiv(2020)10.26434/chemrxiv.12770225.v1

N/A

0DataRank · unranked

1 citations

Feixiong Cheng, William R. Martin

AlzGPS: A Genome-wide Positioning Systems Platform to Catalyze Multi-omics for Alzheimer’s Therapeutic Discovery

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.17.302612

N/A

0DataRank · unranked

0 citations

Jiansong Fang, Lynn M. Bekris, Young Heon Kim, Andrew A. Pieper, James B. Leverenz +3 more

Comprehensive characterization of protein-protein interaction network perturbations by human disease mutations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.18.302588

N/A

0DataRank · unranked

0 citations

Junfei Zhao, Yang Wang, Weiqiang Lü, Zehui Liu, Yadi Zhou +19 more

Endophenotype-based in silico network medicine discovery combined with insurance record data mining identifies sildenafil as a candidate drug for Alzheimer’s disease

Nature Aging(2021)10.1038/s43587-021-00138-z

N/A

0DataRank · unranked

201 citations

Pengyue Zhang, Yadi Zhou, Chien‐Wei Chiang, Juan Tan, Yuan Hou +6 more

AlzGPS: a genome-wide positioning systems platform to catalyze multi-omics for Alzheimer’s drug discovery

Alzheimer s Research & Therapy(2021)10.1186/s13195-020-00760-w

N/A

0DataRank · unranked

88 citations

Jiansong Fang, Lynn M. Bekris, Young Heon Kim, Andrew A. Pieper, James B. Leverenz +3 more

Multimodal single-cell omics analysis identifies epithelium–immune cell interactions and immune vulnerability associated with sex differences in COVID-19

Signal Transduction and Targeted Therapy(2021)10.1038/s41392-021-00709-x

N/A

0DataRank · unranked

30 citations

Yadi Zhou, Michaela U. Gack, Justin D. Lathia, Asha Kallianpur, Reena Mehra +6 more

A new precision medicine initiative at the dawn of exascale computing

Signal Transduction and Targeted Therapy(2021)10.1038/s41392-020-00420-3

N/A

0DataRank · unranked

55 citations

Hyunbum Jang, Guy Nir, Chung‐Jung Tsai, Feixiong Cheng, Ruth Nussinov

Cardiac risk stratification in cancer patients: A longitudinal patient–patient network analysis

PLoS Medicine(2021)10.1371/journal.pmed.1003736

N/A

0DataRank · unranked

35 citations

Yadi Zhou, Muzna Hussain, G. Thomas Budd, W. H. Wilson Tang, James Abraham +14 more

A rational design of a multi-epitope vaccine against SARS-CoV-2 which accounts for the glycan shield of the spike glycoprotein

Journal of Biomolecular Structure and Dynamics(2021)10.1080/07391102.2021.1894986

N/A

0DataRank · unranked

31 citations

Feixiong Cheng, William R. Martin

A retrospective analysis of cardiovascular adverse events associated with immune checkpoint inhibitors

Cardio-Oncology(2021)10.1186/s40959-021-00106-x

N/A

0DataRank · unranked

29 citations

Sherry‐Ann Brown, Patrick Collier, Feixiong Cheng, Jessica C. Lal

Systemic Administration of Tempol Attenuates the Cardiorespiratory Depressant Effects of Fentanyl

Frontiers in Pharmacology(2021)10.3389/fphar.2021.690407

N/A

0DataRank · unranked

24 citations

Ryan B. Gruber, Joseph F. Discala, Veljko Puskovic, Nijo Jose, Feixiong Cheng +4 more

Interpretable artificial intelligence and exascale molecular dynamics simulations to reveal kinetics: Applications to Alzheimer's disease

Current Opinion in Structural Biology(2021)10.1016/j.sbi.2021.09.001

N/A

0DataRank · unranked

20 citations

Gloria Sheynkman, Felice C. Lightstone, Ruth Nussinov, Feixiong Cheng, William R. Martin

NHLBI-CMREF Workshop Report on Pulmonary Vascular Disease Classification

Journal of the American College of Cardiology(2021)10.1016/j.jacc.2021.02.056

N/A

0DataRank · unranked

20 citations

Anna R. Hemnes, Micheala A. Aldred, John Barnard, Evan L. Brittain, Stephen Y. Chan +26 more

Multimodal single-cell/nucleus RNA sequencing data analysis uncovers molecular networks between disease-associated microglia and astrocytes with implications for drug repurposing in Alzheimer's disease

Genome Research(2021)10.1101/gr.272484.120

N/A

0DataRank · unranked

82 citations

Pengyue Zhang, Yin Huang, Yadi Zhou, Yuan Hou, Lynn M. Bekris +8 more

A Network-based Deep Learning Framework Catalyzes GWAS and Multi-Omics Findings to Biology and Drug Repurposing for Alzheimer’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.20.465087

N/A

0DataRank · unranked

2 citations

Yuan Hou, Yadi Zhou, Ming Hu, Feixiong Cheng, Jielin Xu

Network-based prediction and functional validation of metformin for potential treatment of atrial fibrillation using human inducible pluripotent stem cell-derived atrial-like cardiomyocytes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.17.460826

N/A

0DataRank · unranked

1 citations

Yadi Zhou, Shamone R. Gore-Panter, Julie H. Rennison, John Barnard, David R. Van Wagoner +3 more

dynaPhenoM: Dynamic Phenotype Modeling from Longitudinal Patient Records Using Machine Learning

medRxiv(2021)10.1101/2021.11.01.21265725

N/A

0DataRank · unranked

1 citations

Chengxi Zang, Jie Xu, Hansi Zhang, Sajjad Fouladvand, Shreyas Havaldar +7 more

Analyses of GWAS and sub-threshold loci lead to the discovery of dendrite development and morphology dysfunction underlying schizophrenia genetic risk

Research Square(2021)10.21203/rs.3.rs-240477/v1

N/A

0DataRank · unranked

0 citations

Quan Wang, Chongchong Xu, Qiang Wei, Hai Yang, James S. Sutcliffe +9 more

Horizontal mitochondrial transfer from the microenvironment increases glioblastoma tumorigenicity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.01.458565

N/A

0DataRank · unranked

0 citations

Defne Bayık, Sarah Williford, Adam Lauko, Yadi Zhou, Gauravi Deshpande +6 more

Astrocytes donate mitochondria to increase glioblastoma tumorigenicity

Research Square(2021)10.21203/rs.3.rs-923533/v1

N/A

0DataRank · unranked

0 citations

Dionysios C. Watson, Defne Bayık, Sarah Williford, Adam Lauko, Yadi Zhou +6 more

Deep generative molecular design reshapes drug discovery

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100794

N/A

0DataRank · unranked

284 citations

Fei Wang, Yuan Luo, Seung-Gu Kang, Jian Tang, Felice C. Lightstone +5 more

Accurate prediction of molecular properties and drug targets using a self-supervised image representation learning framework

Nature Machine Intelligence(2022)10.1038/s42256-022-00557-6

N/A

0DataRank · unranked

274 citations

Hongxin Xiang, Linhui Yu, Jianmin Wang, Kenli Li, Ruth Nussinov +2 more

A comprehensive SARS-CoV-2–human protein–protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets

Nature Biotechnology(2022)10.1038/s41587-022-01474-0

N/A

0DataRank · unranked

203 citations

Yuan Liu, Shagun Gupta, Mauricio I. Paramo, Yuan Hou, Chengsheng Mao +18 more

Artificial intelligence framework identifies candidate targets for drug repurposing in Alzheimer’s disease

Alzheimer s Research & Therapy(2022)10.1186/s13195-021-00951-z

N/A

0DataRank · unranked

121 citations

Pengyue Zhang, Quan Wang, Chien‐Wei Chiang, Yadi Zhou, Yuan Hou +11 more

Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer’s disease

Cell Reports(2022)10.1016/j.celrep.2022.111717

N/A

0DataRank · unranked

106 citations

Chengsheng Mao, Yuan Hou, Yuan Luo, Jessica Binder, Yadi Zhou +12 more

Artificial intelligence and imaging: Opportunities in cardio-oncology

American Heart Journal Plus Cardiology Research and Practice(2022)10.1016/j.ahjo.2022.100126

N/A

0DataRank · unranked

57 citations

Julliette Lucas, Nausheen Akhter, Patrick Collier, Feixiong Cheng, Avirup Guha +9 more

Transcriptomics-based network medicine approach identifies metformin as a repurposable drug for atrial fibrillation

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100749

N/A

0DataRank · unranked

48 citations

Chengsheng Mao, Yadi Zhou, Shamone R. Gore-Panter, Julie H. Rennison, Beth Lovano +10 more

Establishing an interdisciplinary research team for cardio-oncology artificial intelligence informatics precision and health equity

American Heart Journal Plus Cardiology Research and Practice(2022)10.1016/j.ahjo.2022.100094

N/A

0DataRank · unranked

32 citations

Rodney Sparapani, Kristen Osinski, Jun Zhang, Jeffrey Blessing, Feixiong Cheng +15 more

Single-cell network biology characterizes cell type gene regulation for drug repurposing and phenotype prediction in Alzheimer’s disease

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010287

N/A

0DataRank · unranked

30 citations

Jielin Xu, Ting Jin, Saniya Khullar, Xiaoyu Liu, Sayali Alatkar +3 more

Population‐based discovery and Mendelian randomization analysis identify telmisartan as a candidate medicine for Alzheimer's disease in African Americans

Alzheimer s & Dementia(2022)10.1002/alz.12819

N/A

0DataRank · unranked

26 citations

Yuan Hou, Wanzhu Tu, Noll L. Campbell, Andrew A. Pieper, James B. Leverenz +4 more

Quantitative trait locus (xQTL) approaches identify risk genes and drug targets from human non-coding genomes

Human Molecular Genetics(2022)10.1093/hmg/ddac208

N/A

0DataRank · unranked

24 citations

Yuan Hou, Charis Eng, Feixiong Cheng, M. Bykova

Peripheral sTREM2-Related Inflammatory Activity Alterations in Early-Stage Alzheimer’s Disease

The Journal of Immunology(2022)10.4049/jimmunol.2100771

N/A

0DataRank · unranked

18 citations

Maria Khrestian, Elizabeth D. Tuason, Yvonne Shao, Jagan A. Pillai, Stephen M. Rao +8 more

Shape shifting: The multiple conformational substates of the PTEN N‐terminal PIP2‐binding domain

Protein Science(2022)10.1002/pro.4308

N/A

0DataRank · unranked

13 citations

Iris Nira Smith, William R. Martin, Krishnendu Khan, Feixiong Cheng, Charis Eng +1 more

Human Molecular Genetics Review Issue 2022

Human Molecular Genetics(2022)10.1093/hmg/ddac219

N/A

0DataRank · unranked

6 citations

Daniel H. Geschwind, Feixiong Cheng

Accurate prediction of molecular targets using a self-supervised image representation learning framework

Research Square(2022)10.21203/rs.3.rs-1477870/v1

N/A

0DataRank · unranked

11 citations

Hongxin Xiang, Linhui Yu, Jianmin Wang, Kenli Li, Ruth Nussinov +2 more

Deep learning for drug repurposing: methods, databases, and applications

arXiv (Cornell University)(2022)10.48550/arxiv.2202.05145

N/A

0DataRank · unranked

11 citations

Xuan Lin, Dongsheng Cao, Xiangxiang Zeng, Philip S. Yu, Lifang He +3 more

High-Throughput Clinical Trial Emulation with Real World Data and Machine Learning: A Case Study of Drug Repurposing for Alzheimer’s Disease

medRxiv(2022)10.1101/2022.01.31.22270132

N/A

0DataRank · unranked

7 citations

Hao Zhang, Jie Xu, Hansi Zhang, Sajjad Fouladvand, Shreyas Havaldar +8 more

Altered Gene Expression in Excitatory Neurons is Associated with Alzheimer’s Disease and Its Higher Incidence in Women

Research Square(2022)10.21203/rs.3.rs-1953485/v1

N/A

0DataRank · unranked

2 citations

Jielin Xu, Feixiong Cheng, Eytan Ruppin, Alejandro A. Schäffer, A. Xavier Garcia

Single-cell network biology characterizes cell type gene regulation for drug repurposing and phenotype prediction in Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.09.475548

N/A

0DataRank · unranked

0 citations

Jielin Xu, Ting Jin, Saniya Khullar, Xiaoyu Liu, Sayali Alatkar +3 more

GAP43-dependent mitochondria transfer from astrocytes enhances glioblastoma tumorigenicity

Nature Cancer(2023)10.1038/s43018-023-00556-5

N/A

0DataRank · unranked

221 citations

Defne Bayık, Simon Storevik, Shannon Sherwin Moreino, Samuel A. Sprowls, Jianhua Han +37 more

Graph embedding and Gaussian mixture variational autoencoder network for end-to-end analysis of single-cell RNA sequencing data

Cell Reports Methods(2023)10.1016/j.crmeth.2022.100382

N/A

0DataRank · unranked

98 citations

Jielin Xu, Yajie Meng, Changcheng Lu, Lijun Cai, Xiangxiang Zeng +3 more

High-throughput target trial emulation for Alzheimer’s disease drug repurposing with real-world data

Nature Communications(2023)10.1038/s41467-023-43929-1

N/A

0DataRank · unranked

60 citations

Hao Zhang, Jie Xu, Hansi Zhang, Sajjad Fouladvand, Shreyas Havaldar +8 more

Team principles for successful interdisciplinary research teams

American Heart Journal Plus Cardiology Research and Practice(2023)10.1016/j.ahjo.2023.100306

N/A

0DataRank · unranked

47 citations

Rodney Sparapani, Kristen Osinski, Jun Zhang, Jeffrey Blessing, Feixiong Cheng +15 more

Microglial immunometabolism endophenotypes contribute to sex difference in Alzheimer's disease

Alzheimer s & Dementia(2023)10.1002/alz.13546

N/A

0DataRank · unranked

22 citations

Jessica Caldwell, Justin D. Lathia, James B. Leverenz, Andrew A. Pieper, Jeffrey L. Cummings +2 more

MBOAT7-driven lysophosphatidylinositol acylation in adipocytes contributes to systemic glucose homeostasis

Journal of Lipid Research(2023)10.1016/j.jlr.2023.100349

N/A

0DataRank · unranked

19 citations

Venkateshwari Varadharajan, Rakhee Banerjee, Amanda L. Brown, Anthony Horak, Rachel C. Hohe +11 more

PDE5 inhibitor drugs for use in dementia

Alzheimer s & Dementia Translational Research & Clinical Interventions(2023)10.1002/trc2.12412

N/A

0DataRank · unranked

18 citations

Ottavio Arancio, Fanny M. Elahi, Jeremy D. Isaacs, Feixiong Cheng, Atticus H. Hainsworth

A Foundation Model Identifies Broad-Spectrum Antimicrobial Peptides against Drug-Resistant Bacterial Infection

Nature Communications(2024)10.1038/s41467-024-51933-2

N/A

0DataRank · unranked

105 citations

Xuanbai Ren, Xiaoli Luo, Zhuole Wang, Zhen‐lu Li, Xiaoyan Luo +8 more

Artificial intelligence for drug discovery and development in Alzheimer's disease

Current Opinion in Structural Biology(2024)10.1016/j.sbi.2024.102776

N/A

0DataRank · unranked

68 citations

Feixiong Cheng, Yunguang Qiu

Alzheimer’s disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model

Neuron(2024)10.1016/j.neuron.2024.09.006

N/A

0DataRank · unranked

60 citations

Li Fan, Nessa Foxe, Kendra Norman, Man Ying Wong, Daphne Zhu +25 more

Artificial intelligence and open science in discovery of disease-modifying medicines for Alzheimer’s disease

Cell Reports Medicine(2024)10.1016/j.xcrm.2023.101379

N/A

0DataRank · unranked

57 citations

Fei Wang, Jian Tang, Yadi Zhou, Zhimin Fu, Pengyue Zhang +8 more

Systematic characterization of multi-omics landscape between gut microbial metabolites and GPCRome in Alzheimer’s disease

Cell Reports(2024)10.1016/j.celrep.2024.114128

N/A

0DataRank · unranked

34 citations

Yuan Hou, Dhruv Gohel, Yadi Zhou, Jielin Xu, Marina Bykova +8 more

A molecular video-derived foundation model for scientific drug discovery

Nature Communications(2024)10.1038/s41467-024-53742-z

N/A

0DataRank · unranked

33 citations

Li Zeng, Linlin Hou, Kenli Li, Zhimin Fu, Yunguang Qiu +6 more

Acutely blocking excessive mitochondrial fission prevents chronic neurodegeneration after traumatic brain injury

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101715

N/A

0DataRank · unranked

32 citations

Yeojung Koh, Emiko Miller, Di Hu, Suwarna Chakraborty, Sunil Jamuna Tripathi +24 more

Sildenafil as a Candidate Drug for Alzheimer’s Disease: Real-World Patient Data Observation and Mechanistic Observations from Patient-Induced Pluripotent Stem Cell-Derived Neurons

Journal of Alzheimer s Disease(2024)10.3233/jad-231391

N/A

0DataRank · unranked

18 citations

Pengyue Zhang, Amit Gupta, Yi‐Chen Li, Chien‐Wei Chiang, Lang Li +5 more

Single‐microglia transcriptomic transition network‐based prediction and real‐world patient data validation identifies ketorolac as a repurposable drug for Alzheimer's disease

Alzheimer s & Dementia(2024)10.1002/alz.14373

N/A

0DataRank · unranked

13 citations

Wenqiang Song, Zhenxing Xu, Michael M. Danziger, Ehud Karavani, Chengxi Zang +16 more

Ras, RhoA, and vascular pharmacology in neurodevelopment and aging

Neurochemistry International(2024)10.1016/j.neuint.2024.105883

N/A

0DataRank · unranked

3 citations

Hyunbum Jang, Feixiong Cheng, Ruth Nussinov

Alzheimer’s disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.24.577107

N/A

0DataRank · unranked

7 citations

Li Fan, Nessa Foxe, Kendra Norman, Pearly Ye, Man Ying Wong +18 more

Single-nucleus multiome analysis of human cerebellum in Alzheimer’s disease-related dementia

Research Square(2024)10.21203/rs.3.rs-4871032/v1

N/A

0DataRank · unranked

4 citations

Yayan Feng, Margaret E. Flanagan, Borna Bonakdarpour, Pouya Jamshidi, Rudolph J. Castellani +12 more

A Molecular Video-derived Foundation Model Streamlines Scientific Drug Discovery

Research Square(2024)10.21203/rs.3.rs-3773235/v1

N/A

0DataRank · unranked

3 citations

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Research Square(2024)10.21203/rs.3.rs-4869009/v1

N/A

0DataRank · unranked

0 citations

Lijun Dou, Zhigang Xu, Jielin Xu, Chang Su, Andrew A. Pieper +5 more

Deep learning-based cell-specific gene regulatory networks inferred from single-cell multiome data

Nucleic Acids Research(2025)10.1093/nar/gkaf138

N/A

0DataRank · unranked

38 citations

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Alzheimer s & Dementia(2025)10.1002/alz.70639

N/A

0DataRank · unranked

16 citations

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A network-based systems genetics framework identifies pathobiology and drug repurposing in Parkinson’s disease

npj Parkinson s Disease(2025)10.1038/s41531-025-00870-y

N/A

0DataRank · unranked

10 citations

Zhenxing Xu, Jielin Xu, Chengxi Zang, Chang Su, Andrew A. Pieper +6 more

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Cell Reports Medicine(2025)10.1016/j.xcrm.2025.102535

N/A

0DataRank · unranked

10 citations

Edwin Vázquez-Rosa, Sunil Jamuna Tripathi, Min-Kyoo Shin, Youngmin Yu, Matasha Dhar +31 more

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Alzheimer s & Dementia(2025)10.1002/alz.14595

N/A

0DataRank · unranked

13 citations

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Advanced Science(2025)10.1002/advs.202513641

N/A

0DataRank · unranked

2 citations

Yuxin Yang, W T Martin, Ko-Chow Lin, Zixu Wang, Cheng‐Chang Lu +6 more

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Research Square(2025)10.21203/rs.3.rs-5716817/v1

N/A

0DataRank · unranked

3 citations

Yuan Hou, Pengyue Zhang, Yi‐Chen Li, Noah Lorincz‐Comi, Fan Fan +27 more

A Deep Subgrouping Framework for Precision Drug Repurposing via Emulating Clinical Trials on Real-world Patient Data

PubMed(2025)10.1145/3690624.3709418

N/A

0DataRank · unranked

1 citations

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Erratum to ‘Utilization of precision medicine digital twins for drug discovery in Alzheimer's disease’, Neurotherapeutics, 22(3), e00553

Neurotherapeutics(2025)10.1016/j.neurot.2025.e00628

N/A

0DataRank · unranked

0 citations

Andrew A. Pieper, Feixiong Cheng, Yunxiao Ren

Systematic characterization of cell type-specific master metabolic regulators in Alzheimer's disease

Research Square(2025)10.21203/rs.3.rs-7207381/v1

N/A

0DataRank · unranked

0 citations

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Advanced Science(2025)10.1002/advs.202508519

N/A

0DataRank · unranked

0 citations

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Alzheimer s & Dementia Translational Research & Clinical Interventions(2025)10.1002/trc2.70193

N/A

0DataRank · unranked

0 citations

Ehud Karavani, Michael M. Danziger, Pengyue Zhang, Yuan Hou, Yadi Zhou +6 more

A network medicine approach to investigation and population-based validation of disease manifestations and drug repurposing for COVID-19

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N/A

0DataRank · unranked

186 citations

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Network-based prediction of drug–target interactions using an arbitrary-order proximity embedded deep forest

Bioinformatics(2020)10.1093/bioinformatics/btaa010

N/A

0DataRank · unranked

152 citations

Siyi Zhu, Yuan Hou, Pengyue Zhang, Lang Li, Jing Li +5 more

SARS-CoV-2 and ACE2: The biology and clinical data settling the ARB and ACEI controversy

EBioMedicine(2020)10.1016/j.ebiom.2020.102907

N/A

0DataRank · unranked

142 citations

Sadashiva S. Karnik, Joshua Saef, Cornelia C. Bergmann, John Barnard, Michael M. Lederman +15 more

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BMC Medicine(2020)10.1186/s12916-020-01673-z

N/A

0DataRank · unranked

456 citations

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Target identification among known drugs by deep learning from heterogeneous networks

Chemical Science(2020)10.1039/c9sc04336e

N/A

0DataRank · unranked

354 citations

Siyi Zhu, Weiqiang Lü, Zehui Liu, Jin Huang, Yadi Zhou +10 more

Myeloid-Derived Suppressor Cell Subsets Drive Glioblastoma Growth in a Sex-Specific Manner

Cancer Discovery(2020)10.1158/2159-8290.cd-19-1355

N/A

0DataRank · unranked

241 citations

Yadi Zhou, Chihyun Park, Changjin Hong, Daniel Vail, Daniel J. Silver +18 more

Harnessing endophenotypes and network medicine for Alzheimer's drug repurposing

Medicinal Research Reviews(2020)10.1002/med.21709

N/A

0DataRank · unranked

96 citations

Andrew A. Pieper, Ruth Nussinov, Garam Lee, Lynn M. Bekris, James B. Leverenz +3 more

Epilepsy subtype-specific copy number burden observed in a genome-wide study of 17 458 subjects

Brain(2020)10.1093/brain/awaa171

N/A

0DataRank · unranked

81 citations

Eduardo Pérez‐Palma, Daniel P. Howrigan, Yadi Zhou, Feixiong Cheng, Elmo Saarentaus +86 more

Mechanical forces induce an asthma gene signature in healthy airway epithelial cells

Scientific Reports(2020)10.1038/s41598-020-57755-8

N/A

0DataRank · unranked

60 citations

Asher Ameli, Jin‐Ah Park, Alvin T. Kho, Kelan G. Tantisira, Marc Santolini +11 more

Individualized genetic network analysis reveals new therapeutic vulnerabilities in 6,700 cancer genomes

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007701

N/A

0DataRank · unranked

52 citations

Junfei Zhao, Weiqiang Lü, Yao Dai, Jennifer Hockings, Yadi Zhou +4 more

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BMC Biology(2020)10.1186/s12915-020-00868-3

N/A

0DataRank · unranked

36 citations

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