Melissa Gymrek

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

4.1Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A deep population reference panel of tandem repeat variation

Nature Communications(2023)10.1038/s41467-023-42278-3

Top 13%

1.7DataRank

Top 13%76 citations

Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba +17 more

Papers

Driven by 40 papers — median percentile 76. Top paper: “A deep population reference panel of tandem repeat variation”.

A deep population reference panel of tandem repeat variation

Nature Communications(2023)10.1038/s41467-023-42278-3

Top 13%

1.7DataRank

Top 13%76 citations

Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba +17 more

Mutation and selection processes regulating short tandem repeats give rise to genetic and phenotypic diversity across species

Journal of Evolutionary Biology(2022)10.1111/jeb.14106

N/A

1.5DataRank · unranked

71 citations

Mikhail O. Maksimov, Jin Ye, Maria Anisimova, Melissa Gymrek, Tugce Bilgin Sonay +1 more

Polymorphic short tandem repeats make widespread contributions to blood and serum traits

Cell Genomics(2023)10.1016/j.xgen.2023.100458

N/A

1.3DataRank · unranked

52 citations

Shai Fuchs, Yang Li, Xuan Zhang, Arya R Massarat, Alon Goren +2 more

WebSTR: A Population-wide Database of Short Tandem Repeat Variation in Humans

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168260

Top 20%

1.0DataRank

Top 20%29 citations

Max A. Verbiest, Feifei Xia, Helyaneh Ziaei Jam, Inti Zlobec, Maria Anisimova +2 more

A deep population reference panel of tandem repeat variation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.09.531600

Top 29%

0.698DataRank

Top 29%12 citations

Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba +17 more

Deep sequencing of a large family of isogenic mice enables complex variants discovery and accurate phenotype mapping

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.21.489063

Top 29%

0.679DataRank

Top 29%16 citations

Thomas A. Sasani, Mikhail O. Maksimov, Mustafa Hakan Gunturkun, Nichole Ma, Yu-yu Ren +11 more

Defining a tandem repeat catalog and variation clusters for genome-wide analyses

10.1101/2024.10.04.615514

N/A

0.550DataRank · unranked

15 citations

Egor Dolzhenko, Mark F. Bennett, Matt C. Danzi, Isaac R. L. Xu, Hope Tanudisastro +18 more

Variable number tandem repeats mediate the expression of proximal genes

Nature Communications(2021)10.1038/s41467-021-22206-z

N/A

0DataRank · unranked

107 citations

Jonghun Park, Yuan-Chun Ding, Sharona Shleizer-Burko, Susan L. Neuhausen, Bjarni V. Halldórsson +4 more

Deep neural networks identify sequence context features predictive of transcription factor binding

Nature Machine Intelligence(2021)10.1038/s42256-020-00282-y

N/A

0DataRank · unranked

101 citations

Michael Lamkin, Hanqing Zhao, Cynthia Wu, Hao Su, Melissa Gymrek +1 more

Mechanisms underlying divergent responses of genetically distinct macrophages to IL-4

Science Advances(2021)10.1126/sciadv.abf9808

N/A

0DataRank · unranked

55 citations

Zeyang Shen, Inge R. Holtman, An Zheng, Nathan J. Spann, Isidoro Cobo +3 more

Analysis of Brugada syndrome loci reveals that fine-mapping clustered GWAS hits enhances the annotation of disease-relevant variants

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100250

N/A

0DataRank · unranked

8 citations

Bernat del Olmo, Adrian Pérez-Agustín, Jesús Matés, Catarina Allegue, Anna Iglesias +13 more

A flexible ChIP-sequencing simulation toolkit

BMC Bioinformatics(2021)10.1186/s12859-021-04097-5

N/A

0DataRank · unranked

8 citations

Michael Lamkin, Yutong Qiu, Kevin Ren, Alon Goren, Melissa Gymrek +1 more

Missing heritability may be hiding in repeats

Science(2021)10.1126/science.abl7794

N/A

0DataRank · unranked

22 citations

Alon Goren, Melissa Gymrek

Patterns of de novo tandem repeat mutations and their role in autism

Nature(2021)10.1038/s41586-020-03078-7

N/A

0DataRank · unranked

220 citations

Bonnie Huang, Nima Mousavi, Nichole Ma, Michael Lamkin, Richard Yanicky +4 more

SNPs, short tandem repeats, and structural variants are responsible for differential gene expression across C57BL/6 and C57BL/10 substrains

Cell Genomics(2022)10.1016/j.xgen.2022.100102

N/A

0DataRank · unranked

24 citations

Yangsu Ren, Shubham Saini, Danny Antaki, Celine L. St. Pierre, April E. Williams +6 more

Deep neural networks identify context-specific determinants of transcription factor binding affinity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.26.965343

N/A

0DataRank · unranked

3 citations

Michael Lamkin, Cynthia Wu, Hao Su, Melissa Gymrek, An Zheng

Polymorphic short tandem repeats make widespread contributions to blood and serum traits

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.01.502370

N/A

0DataRank · unranked

16 citations

Shai Fuchs, Yang Li, Xuan Zhang, Arya R Massarat, Alon Goren +2 more

Genome-wide selection inference at short tandem repeats

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.12.491726

N/A

0DataRank · unranked

4 citations

Arun Durvasula, Nima Mousavi, Helyaneh Ziaei-Jam, Mikhail O. Maksimov, Kirk E. Lohmueller +2 more

A novel quantitative trait locus implicates Msh3 in the propensity for genome-wide short tandem repeat expansions in mice

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.02.482700

N/A

0DataRank · unranked

3 citations

David G. Ashbrook, Flavia Villani, Vincenza Colonna, Nima Mousavi, Nichole Ma +3 more

Genome-wide patterns of de novo tandem repeat mutations and their contribution to autism spectrum disorders

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.04.974170

N/A

0DataRank · unranked

5 citations

Bonnie Huang, Nima Mousavi, Nichole Ma, Michael Lamkin, Richard Yanicky +4 more

Mechanisms underlying divergent responses of genetically distinct macrophages to IL-4

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.02.365742

N/A

0DataRank · unranked

7 citations

Zeyang Shen, Inge R. Holtman, An Zheng, Nathan J. Spann, Isidoro Cobo +3 more

TRTools: a toolkit for genome-wide analysis of tandem repeats

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.17.996033

N/A

0DataRank · unranked

11 citations

Jonathan Margoliash, Neha Pusarla, Shubham Saini, Richard Yanicky, Melissa Gymrek +1 more

Haptools: a toolkit for admixture and haplotype analysis

Bioinformatics(2023)10.1093/bioinformatics/btad104

N/A

0DataRank · unranked

15 citations

Michael Lamkin, Ciara Reeve, Amy L. Williams, Matteo D’Antonio, Melissa Gymrek +1 more

Deep learning predicts the impact of regulatory variants on cell-type-specific enhancers in the brain

Bioinformatics Advances(2023)10.1093/bioadv/vbad002

N/A

0DataRank · unranked

3 citations

Zeyang Shen, Christopher K. Glass, Melissa Gymrek, An Zheng

Benchmarking of small and large variants across tandem repeats

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.29.564632

N/A

0DataRank · unranked

17 citations

Egor Dolzhenko, Helyaneh Ziaei Jam, Sean K. McKenzie, Nathan D. Olson, Wouter De Coster +9 more

Variable Number Tandem Repeats mediate the expression of proximal genes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.25.114082

N/A

0DataRank · unranked

14 citations

Jonghun Park, Yuan-Chun Ding, Sharona Shleizer-Burko, Susan L. Neuhausen, Bjarni V. Halldórsson +4 more

A novel quantitative trait locus implicates Msh3 in the propensity for genome-wide short tandem repeat expansions in mice

Genome Research(2023)10.1101/gr.277576.122

N/A

0DataRank · unranked

7 citations

Cynthia Wu, David G. Ashbrook, Flavia Villani, Vincenza Colonna, Nima Mousavi +8 more

Genome-wide detection of somatic mosaicism at short tandem repeats

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.22.568371

N/A

0DataRank · unranked

2 citations

Helyaneh Ziaei-Jam, Andrew Shen, Melissa Gymrek, Aarushi Sehgal

Analysis and benchmarking of small and large genomic variants across tandem repeats

Nature Biotechnology(2024)10.1038/s41587-024-02225-z

N/A

0DataRank · unranked

67 citations

Egor Dolzhenko, Helyaneh Ziaei Jam, Sean K. McKenzie, Nathan D. Olson, Wouter De Coster +9 more

LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads

Genome biology(2024)10.1186/s13059-024-03319-2

N/A

0DataRank · unranked

28 citations

Justin M. Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek +1 more

Genome-wide detection of somatic mosaicism at short tandem repeats

Bioinformatics(2024)10.1093/bioinformatics/btae485

N/A

0DataRank · unranked

11 citations

Helyaneh Ziaei Jam, Andrew Shen, Melissa Gymrek, Aarushi Sehgal

Genome-wide profiling of genetic variation at tandem repeat from long reads

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.20.576266

N/A

0DataRank · unranked

6 citations

Justin M. Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek +1 more

A highly accurate risk factor-based XGBoost multiethnic model for identifying patients with skin cancer

Nature Communications(2025)10.1038/s41467-025-64556-y

N/A

0DataRank · unranked

6 citations

Wilfredo G. Gonzalez Rivera, Robert A. Greenes, Melissa Gymrek, Kelly A. Frazer, Matteo D’Antonio

Genome editing with programmable base editors in human cells

Methods in enzymology on CD-ROM/Methods in enzymology(2025)10.1016/bs.mie.2025.01.001

N/A

0DataRank · unranked

5 citations

Natalie M. Zawalick, Courtney B Sawyer, Quinn T. Cowan, Sifeng Gu, S J Mawson +6 more

Genetic analysis of elevated levels of creatinine and cystatin C biomarkers reveals novel genetic loci associated with kidney function

Human Molecular Genetics(2025)10.1093/hmg/ddaf018

N/A

0DataRank · unranked

2 citations

Timothy D. Arthur, Wilfredo G Gonzalez Rivera, Ximei Wu, Jennifer Nguyen, Melissa Gymrek +3 more

Systematic evaluation of the impact of promoter proximal short tandem repeats on expression

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.14.676153

N/A

0DataRank · unranked

2 citations

Zhang Lingzhi, Ellice Wang, Susan M. Benton, Eduardo Modolo, М. В. Максимов +8 more

Modeling nonlinear and interaction effects of spatiotemporal and other non-genetic factors improves phenotypic prediction for complex traits

medRxiv(2025)10.1101/2025.11.26.25341090

N/A

0DataRank · unranked

1 citations

Melissa Gymrek, Ross DeVito

Characterization of shared and ancestry-specific signals driving complex traits using multi-ancestry fine-mapping

medRxiv(2025)10.1101/2025.11.13.25339614

N/A

0DataRank · unranked

0 citations

Nichole Ma, Jonathan Margoliash, Wilfredo G. Gonzalez Rivera, Tiffany Amariuta, Kelly A. Frazer +3 more

Genome-wide selection inference at short tandem repeats

PLoS Genetics(2025)10.1371/journal.pgen.1011959

N/A

0DataRank · unranked

0 citations

Arun Durvasula, Nima Mousavi, Helyaneh Ziaei Jam, М. В. Максимов, Kirk E. Lohmueller +2 more

TRTools: a toolkit for genome-wide analysis of tandem repeats

Bioinformatics(2020)10.1093/bioinformatics/btaa736

N/A

0DataRank · unranked

66 citations

Jonathan Margoliash, Neha Pusarla, Shubham Saini, Richard Yanicky, Melissa Gymrek +1 more

Melissa Gymrek

Indexed papers

Top data-sharing exemplar

Papers