Serghei Mangul

Also affiliated with Ştefan cel Mare University of Suceava, Jagiellonian University, Sage Bionetworks, Technical University of Moldova, Mohamed bin Zayed University of Artificial Intelligence

Biochemistry, Genetics and Molecular BiologyDecision Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

26.2Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genetic effects on gene expression across human tissues

Nature(2017)10.1038/nature24277

Top 1%

10.1DataRank

Top 1%4706 citations

Barbara E. Engelhardt, Stephen B. Montgomery, Sara Mostafavi, Ayellet V. Segrè, Hailei Zhang +227 more

Papers

Driven by 45 papers — median percentile 94. Top paper: “Cell type–specific genetic regulation of gene expression across human tissues”.

Cell type–specific genetic regulation of gene expression across human tissues

Science(2020)10.1126/science.aaz8528

N/A

10.3DataRank · unranked

596 citations

François Aguet, Meritxell Oliva, Manuel Muñoz-Aguirre, Silva Kasela, Valentin Wucher +77 more

Genetic effects on gene expression across human tissues

Nature(2017)10.1038/nature24277

Top 1%

10.1DataRank

Top 1%4706 citations

Barbara E. Engelhardt, Stephen B. Montgomery, Sara Mostafavi, Ayellet V. Segrè, Hailei Zhang +227 more

The impact of sex on gene expression across human tissues

Science(2020)10.1126/science.aba3066

N/A

9.0DataRank · unranked

727 citations

Manuel Muñoz-Aguirre, Sarah Kim-Hellmuth, Valentin Wucher, Ariel DH Gewirtz, Daniel J. Cotter +72 more

Determinants of telomere length across human tissues

Science(2020)10.1126/science.aaz6876

N/A

8.6DataRank · unranked

501 citations

Farzana Jasmine, Lin Chen, Meytal Chernoff, Tong Lin, Dayana Delgado +90 more

The GTEx Consortium atlas of genetic regulatory effects across human tissues

Science(2020)10.1126/science.aaz1776

Top 2%

8.0DataRank

Top 2%5930 citations

Shankara Anand, Kristin G. Ardlie, Stacey Gabriel, Gad Getz, Aaron Graubert +95 more

Intratumoral CD4+ T Cells Mediate Anti-tumor Cytotoxicity in Human Bladder Cancer

Cell(2020)10.1016/j.cell.2020.05.017

N/A

5.5DataRank · unranked

749 citations

Serena S. Kwek, Siddharth S. Raju, Tony Li, Elizabeth McCarthy, Eric D. Chow +15 more

A Quantitative Proteome Map of the Human Body

Cell(2020)10.1016/j.cell.2020.08.036

Top 4%

5.1DataRank

Top 4%487 citations

Meng Wang, Shin Lin, Ruiqi Jian, Xiao Li, Joanne Chan +95 more

Transcriptomic signatures across human tissues identify functional rare genetic variation

Science(2020)10.1126/science.aaz5900

N/A

5.0DataRank · unranked

166 citations

Benjamin J. Strober, Jonah Einson, Nathan S. Abell, François Aguet, Alvaro N. Barbeira +183 more

A vast resource of allelic expression data spanning human tissues

Genome Biology(2020)10.1186/s13059-020-02122-z

Top 8%

2.7DataRank

Top 8%147 citations

François Aguet, Pejman Mohammadi, Kristin G. Ardlie, Anthony Philippakis, Leanne Haggerty +159 more

Benchmarking of computational error-correction methods for next-generation sequencing data

Genome biology(2020)10.1186/s13059-020-01988-3

N/A

1.9DataRank · unranked

59 citations

Jaqueline Brito, Igor Mandric, Qiaozhen Wu, Sergey Knyazev, Sei Chang +21 more

Diversity in immunogenomics: the value and the challenge

Nature Methods(2021)10.1038/s41592-021-01169-5

N/A

1.6DataRank · unranked

80 citations

Yana Safonova, Mikhail Shugay, Alice B. Popejoy, Oscar L. Rodriguez, Felix Breden +30 more

Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease

Cell(2021)10.1016/j.cell.2021.03.050

N/A

0.804DataRank · unranked

212 citations

Daniel C. Nachun, Nicole M. Ferraro, Michael J. Gloudemans, Abhiram S. Rao, Craig Smail +168 more

Application of Traditional Vaccine Development Strategies to SARS-CoV-2

mSystems(2023)10.1128/msystems.00927-22

N/A

0.718DataRank · unranked

22 citations

Alexandra J. Lee, Elizabeth Sell, Likhitha Kolla, Anthony Gitter, Casey S. Greene +32 more

The Coming of Age of Nucleic Acid Vaccines during COVID-19

mSystems(2023)10.1128/msystems.00928-22

N/A

0.709DataRank · unranked

22 citations

Ronan Lordan, Likhitha Kolla, Elizabeth Sell, Alexandra J. Lee, Nils Wellhausen +46 more

The evolution of computational research in a data-centric world

Cell(2024)10.1016/j.cell.2024.07.045

N/A

0.563DataRank · unranked

15 citations

Karishma Chhugani, Tejasvene Ramesh, Matteo Pellegrini, Sagiv Shifman, Malak S. Abedalthagafi +18 more

Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies

Cell Genomics(2025)10.1016/j.xgen.2025.100845

N/A

0.517DataRank · unranked

18 citations

Viorel Munteanu, Michael I. Love, Cynthia Flaire Ronkowski, Dhrithi Deshpande, Annie Wong-Beringer +16 more

Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure

mSystems(2021)10.1128/msystems.00095-21

N/A

0.489DataRank · unranked

25 citations

Adam L. MacLean, Alexandra J. Lee, Bharath Ramsundar, Vikas Bansal, Michael P. Robson +24 more

Correction for Rando et al., “Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure”

mSystems(2022)10.1128/msystems.01447-21

N/A

0.241DataRank · unranked

4 citations

Adam L. MacLean, Alexandra J. Lee, Bharath Ramsundar, Vikas Bansal, Michael P. Robson +23 more

The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository

Genome biology(2025)10.1186/s13059-025-03725-0

Top 61%

0.241DataRank

Top 61%4 citations

Pooja Jaiswal, Anushka Rajes, Anushka Yadav, Dottie Yu, Fangyun Liu +22 more

Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies

arXiv (Cornell University)(2023)10.48550/arxiv.2401.02965

N/A

0.192DataRank · unranked

2 citations

Michael I. Love, Cynthia Ronkowski, Dhrithi Deshpande, Lynn M. Schriml, Annie Wong‐Beringer +11 more

The DNA methylation landscape across the TCR loci in patients with acute myeloid leukemia

International Immunopharmacology(2024)10.1016/j.intimp.2024.112376

N/A

0DataRank · unranked

1 citations

John Beckford, Advaith Maya Sanjeev Kumar, Mukund Tamizharasan, Jaqueline Brito, Gangning Liang +3 more

Analysis of metagenomic data

Nature Reviews Methods Primers(2025)10.1038/s43586-024-00376-6

N/A

0DataRank · unranked

62 citations

Judith Rodríguez, Viorel Munteanu, Cynthia Ronkowski, Nitesh Kumar Sharma, Mohammed Alser +35 more

Assessing genomic reproducibility of read alignment tools

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.08.652934

N/A

0DataRank · unranked

0 citations

M. A. Simonov, Dhrithi Deshpande, Ful Belin Korukoglu, Jaden Moore, Karishma Chhugani +7 more

Robust software development practices improve citations of RNA-seq tools

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.05.674580

N/A

0DataRank · unranked

0 citations

Ecem Ilgun, Tuna Okcu, Vladyslav Ostash, V. V. Bashynska, Can Alkan +17 more

CAMP: a modular metagenomics analysis system for integrated multistep data exploration

NAR Genomics and Bioinformatics(2025)10.1093/nargab/lqaf172

N/A

0DataRank · unranked

0 citations

Braden Tierney, Wei Wei, Cynthia Ronkowski, Rodolfo Brizola Toscan, Berk Turhan +95 more

A comprehensive benchmark of discrepancies across microbial genome reference databases

10.64898/2026.03.02.709103

Top 100%

0DataRank

Top 100%0 citations

Peace Aguma, Viorel Munteanu, David Koslicki, Mohammed Alser, Alex Zelikovsky +2 more

Challenges and Recommendations in Establishing National Human Diversity Genomic Projects

arXiv (Cornell University)(2025)10.48550/arxiv.2510.19869

N/A

0DataRank · unranked

0 citations

Walter Wolfsberger, Karishma Chhugani, Yu-Ning Huang, Valerii Pokrytiuk, Khrystyna Shchubelka +36 more

Recommendations to enhance rigor and reproducibility in biomedical research

GigaScience(2020)10.1093/gigascience/giaa056

N/A

0DataRank · unranked

20 citations

Jun Z. Li, Jason H. Moore, Casey S. Greene, Nicole A Nogoy, Lana X Garmire +2 more

Metalign: Efficient alignment-based metagenomic profiling via containment min hash

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.17.910521

N/A

0DataRank · unranked

7 citations

Mohammed Alser, Eleazar Eskin, David Koslicki, Serghei Mangul, Nathan LaPierre

Telescope: an interactive tool for managing large-scale analysis from mobile devices

GigaScience(2020)10.1093/gigascience/giz163

N/A

0DataRank · unranked

0 citations

Thiago Mosqueiro, Jeremy Rotman, Victor Xue, Douglas J. Chapski, Juan De la Hoz +6 more

Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction

Nucleic Acids Research(2021)10.1093/nar/gkab576

N/A

0DataRank · unranked

78 citations

Viachaslau Tsyvina, Anupama Shankar, Andrew Melnyk, Alexander Artyomenko, Tatiana Malygina +7 more

Systematic evaluation of transcriptomics-based deconvolution methods and references using thousands of clinical samples

Briefings in Bioinformatics(2021)10.1093/bib/bbab265

N/A

0DataRank · unranked

27 citations

Meritxell Oliva, Benjamin L. Shou, Keith Mitchell, Feiyang Ma, Dennis Montoya +6 more

Technology dictates algorithms: recent developments in read alignment

Genome biology(2021)10.1186/s13059-021-02443-7

N/A

0DataRank · unranked

9 citations

Jeremy Rotman, Dhrithi Deshpande, Kodi Taraszka, Huwenbo Shi, Pelin Icer Baykal +12 more

Seeing beyond the target: Leveraging off-target reads in targeted clinical tumor sequencing to identify prognostic biomarkers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.28.446240

N/A

0DataRank · unranked

4 citations

Jaqueline Brito, Stefan Groha, Noah Zaitlen, Alexander Gusev, Serghei Mangul

Unlocking capacities of genomics for the COVID-19 response and future pandemics

Nature Methods(2022)10.1038/s41592-022-01444-z

N/A

0DataRank · unranked

67 citations

Karishma Chhugani, Varuni Sarwal, Ram Ayyala, Harman Singh, Smruthi Karthikeyan +30 more

A comprehensive benchmarking of WGS-based deletion structural variant callers

Briefings in Bioinformatics(2022)10.1093/bib/bbac221

N/A

0DataRank · unranked

28 citations

Sebastian Niehus, Ram Ayyala, Minyoung Kim, Aditya Sarkar, Sei Chang +15 more

Rigorous benchmarking of T cell receptor repertoire profiling methods for cancer RNA sequencing

medRxiv(2022)10.1101/2022.03.31.22273249

N/A

0DataRank · unranked

1 citations

Theodore S. Nowicki, Katie M. Campbell, Dandan Peng, Anish Nagareddy, Yu-Ning Huang +10 more

Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing

Briefings in Bioinformatics(2023)10.1093/bib/bbad220

N/A

0DataRank · unranked

18 citations

Theodore S. Nowicki, Katie M. Campbell, Mohammad Vahed, Dandan Peng, Yiting Meng +13 more

The Genomic Landscape of Colorectal Cancer in the Saudi Arabian Population Using a Comprehensive Genomic Panel

Diagnostics(2023)10.3390/diagnostics13182993

N/A

0DataRank · unranked

7 citations

Saleh A. Alqahtani, Musa Fageeh, Duna Barakeh, Nitesh Kumar Sharma, Serghei Mangul +5 more

A benchmark for large language models in bioinformatics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.19.572483

N/A

0DataRank · unranked

9 citations

Gaia Andreoletti, Viorel Munteanu, Ariel Suhodolschi, Dumitru Ciorbă, Viorel Bostan +5 more

A rigorous benchmarking of alignment-based HLA typing algorithms for RNA-seq data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.22.541750

N/A

0DataRank · unranked

5 citations

Ram Ayyala, Sarah Hany Sadek, Likhitha Chittampalli, Hafsa Farooq, Junghyun Jung +12 more

CAMP: A modular metagenomics analysis system for integrated multi-step data exploration

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.09.536171

N/A

0DataRank · unranked

1 citations

Braden Tierney, Wei Wei, Cynthia Ronkowski, Rodolfo Brizola Toscan, Berk Turhan +25 more

Genomic reproducibility in the bioinformatics era

Genome biology(2024)10.1186/s13059-024-03343-2

N/A

0DataRank · unranked

27 citations

Paweł P. Łabaj, Florian Markowetz, Lynn M. Schriml, Daniel J. Stekhoven, Serghei Mangul +2 more

Early detection of emerging viral variants through analysis of community structure of coordinated substitution networks

Nature Communications(2024)10.1038/s41467-024-47304-6

N/A

0DataRank · unranked

10 citations

Alex Zelikovsky, Serghei Mangul, Gerardo Chowell, Pavel Skums, Fatemeh Mohebbi

Analytical code sharing practices in biomedical research

PeerJ Computer Science(2024)10.7717/peerj-cs.2066

N/A

0DataRank · unranked

8 citations

Ram Ayyala, Dhrithi Deshpande, Yesha Patel, Viorel Munteanu, Dumitru Ciorbă +11 more

Serghei Mangul

Indexed papers

Top data-sharing exemplar

Papers