Howard Y. Chang

Amgen (United States)

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.0Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Single-cell multiome of the human retina and deep learning nominate causal variants in complex eye diseases

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.09.483684

Top 19%

1.1DataRank

Top 19%27 citations

Surag Nair, Rui Li, Katerina Kraft, Anusri Pampari, Aman Patel +5 more

Papers

Driven by 141 papers — median percentile 39. Top paper: “Genome-Wide Views of Chromatin Structure”.

Genome-Wide Views of Chromatin Structure

Annual Review of Biochemistry(2009)10.1146/annurev.biochem.78.071107.134639

N/A

11.0DataRank · unranked

338 citations

Howard Y. Chang, Oliver J. Rando

Extrachromosomal DNA is associated with oncogene amplification and poor outcome across multiple cancers

Nature Genetics(2020)10.1038/s41588-020-0678-2

N/A

9.9DataRank · unranked

641 citations

Nam Nguyen, Kristen M. Turner, Sihan Wu, Amit D. Gujar, Jens Luebeck +15 more

Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells

Cell(2023)10.1016/j.cell.2023.08.041

N/A

3.4DataRank · unranked

190 citations

Nadav Brandes, Raymund Bueno, Marena Trinidad, Thomas Mazumder, Bingfei Yu +18 more

Dynamic chromatin regulatory landscape of human CAR T cell exhaustion

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2104758118

N/A

1.9DataRank · unranked

67 citations

Rachel C. Lynn, Jeff M. Granja, Evan Weber, Maxwell R. Mumbach, Yang Zhao +8 more

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Nature Methods(2013)10.1038/nmeth.2688

N/A

1.3DataRank · unranked

6962 citations

Jeff Goldy, Lisa C. Zaba, Howard Y. Chang, William J. Greenleaf, Jason D. Buenrostro

Inducible lncRNA transgenic mice reveal continual role of HOTAIR in promoting breast cancer metastasis

eLife(2022)10.7554/elife.79126

N/A

1.3DataRank · unranked

44 citations

Liuyi Yang, Karen Tolentino, Guiping Wang, Yang Zhao, Ulrike Litzenburger +13 more

Single-cell multiome of the human retina and deep learning nominate causal variants in complex eye diseases

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.09.483684

Top 19%

1.1DataRank

Top 19%27 citations

Surag Nair, Rui Li, Katerina Kraft, Anusri Pampari, Aman Patel +5 more

Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters

Nature Genetics(2011)10.1038/ng.848

N/A

1.0DataRank · unranked

1003 citations

Yulei Wang, Alireza Heravi-Moussavi, Ashley K. Koegel, Yojiro Kotake, Gavin D. Grant +19 more

RNA-binding proteins direct myogenic cell fate decisions

eLife(2022)10.7554/elife.75844

N/A

0.906DataRank · unranked

29 citations

Oscar N. Whitney, Thomas O. Vogler, Éric Nguyen, Bradley Pawlikowski, Evan Lester +12 more

Integrative multi-omic profiling of adult mouse brain endothelial cells and potential implications in Alzheimer’s disease

Cell Reports(2023)10.1016/j.celrep.2023.113392

Top 23%

0.883DataRank

Top 23%33 citations

Yage Nie, Jiawen Yang, Shilun Yang, Rui Li, Varsha Rao +11 more

Invariant natural killer T-cell subsets have diverse graft-versus-host-disease–preventing and antitumor effects

Blood(2021)10.1182/blood.2021010887

N/A

0.850DataRank · unranked

36 citations

Juliane K. Lohmeyer, Toshihito Hirai, Teresa Lopes Ramos, Furqan M. Fazal, Ulrike Litzenburger +13 more

Genetic determinants of co-accessible chromatin regions in activated T cells across humans

Nature Genetics(2018)10.1038/s41588-018-0156-2

N/A

0.799DataRank · unranked

205 citations

Christine S. Cheng, Aviva P. Aiden, Atsede Siba, Marcin Tabaka, Dmytro Lituiev +19 more

CoRAL accurately resolves extrachromosomal DNA genome structures with long-read sequencing

Genome Research(2024)10.1101/gr.279131.124

N/A

0.768DataRank · unranked

34 citations

Matthew G. Jones, Jens Luebeck, Xinxin Bu, Hyerim Yi, King L. Hung +6 more

Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.22.533709

N/A

0.762DataRank · unranked

16 citations

Nadav Brandes, Raymund Bueno, Marena Trinidad, Thomas Mazumder, Bingfei Yu +17 more

Breakage fusion bridge cycles drive high oncogene copy number, but not intratumoral genetic heterogeneity or rapid cancer genome change

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.12.571349

N/A

0.300DataRank · unranked

4 citations

Ivy Tsz-Lo Wong, Jing Ni, Jens Luebeck, Kaiyuan Zhu, Gino Prasad +23 more

Systematic discovery of receptor-ligand biology by engineered cell entry and single-cell genomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.13.472464

N/A

0.149DataRank · unranked

1 citations

Quanming Shi, Julia A. Belk, Kathryn E. Yost, Kevin R. Parker, Huang Huang +5 more

Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters

UNC Libraries(2021)10.17615/wdw5-4544

N/A

0.120DataRank · unranked

1 citations

Yulei Wang, Alireza Heravi-Moussavi, Ashley K. Koegel, Yojiro Kotake, Gavin D. Grant +17 more

CRISPRpic: fast and precise analysis for CRISPR-induced mutations via p refixed i ndex c ounting

NAR Genomics and Bioinformatics(2020)10.1093/nargab/lqaa012

N/A

0DataRank · unranked

23 citations

Howard Y. Chang, Seung Woo Cho, Hanlee P. Ji, HoJoon Lee

Systematic Discovery of Xist RNA Binding Proteins

UNC Libraries(2020)10.17615/ytbg-dg08

N/A

0DataRank · unranked

42 citations

Ryan A. Flynn, Terry Magnuson, Ci Chu, Qiangfeng Cliff Zhang, J. Mauro Calabrese +4 more

Chromatin Landscape Underpinning Human Dendritic Cell Heterogeneity

Cell Reports(2020)10.1016/j.celrep.2020.108180

N/A

0DataRank · unranked

38 citations

Marcela Alcántara‐Hernández, Jeffrey M. Granja, Michael Chavez, Kimberly Perez, Oscar R. Diaz +5 more

Footprinting SHAPE-eCLIP Reveals Transcriptome-wide Hydrogen Bonds at RNA-Protein Interfaces

Molecular Cell(2020)10.1016/j.molcel.2020.11.014

N/A

0DataRank · unranked

37 citations

Ryan A. Flynn, Byron Lee, Steven M. Blue, Howard Y. Chang, G Yeo +1 more

Fitness effects of CRISPR/Cas9-targeting of long noncoding RNA genes

Nature Biotechnology(2020)10.1038/s41587-020-0428-0

N/A

0DataRank · unranked

34 citations

Siyuan Liu, Howard Y. Chang, Daniel A. Lim, Jonathan S. Weissman, Max A. Horlbeck

RNA-GPS predicts high-resolution RNA subcellular localization and highlights the role of splicing

RNA(2020)10.1261/rna.074161.119

N/A

0DataRank · unranked

25 citations

Kevin R. Parker, Furqan M. Fazal, Howard Y. Chang, James Zou, Kevin Wu

Functional annotation of human long noncoding RNAs via molecular phenotyping

Genome Research(2020)10.1101/gr.254219.119

N/A

0DataRank · unranked

199 citations

Chi Wai Yip, Saumya Agrawal, Jen-Chien Chang, Yari Ciani, Ivan V. Kulakovskiy +95 more

ArchR: An integrative and scalable software package for single-cell chromatin accessibility analysis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.28.066498

N/A

0DataRank · unranked

74 citations

M. Ryan Corces, Sarah E. Pierce, S. Tansu Bagdatli, Hani Choudhry, Howard Y. Chang +2 more

Cerebellar nuclei evolved by repeatedly duplicating a conserved cell type set

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.25.170118

N/A

0DataRank · unranked

38 citations

Noam Ringach, Ethan B. Richman, Drew Friedmann, Sai Saroja Kolluru, Robert C. Jones +9 more

RNA-GPS Predicts SARS-CoV-2 RNA Localization to Host Mitochondria and Nucleolus

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.28.065201

N/A

0DataRank · unranked

32 citations

James Zou, Howard Y. Chang, Kevin Wu

Systematic discovery and functional interrogation of SARS-CoV-2 viral RNA-host protein interactions during infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.06.327445

N/A

0DataRank · unranked

30 citations

Julia A. Belk, Yanyan Qi, Yuki Yasumoto, Cameron O. Schmitz, Maxwell R. Mumbach +11 more

Human B cell clonal expansion and convergent antibody responses to SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.08.194456

N/A

0DataRank · unranked

21 citations

Fan Yang, Katherine Jackson, Ramona A. Hoh, Katharina Röltgen, Bryan Stevens +17 more

Polycomb-mediated Genome Architecture Enables Long-range Spreading of H3K27 methylation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.27.223438

N/A

0DataRank · unranked

19 citations

Kathryn E. Yost, Sedona E. Murphy, Andreas Magg, Yicheng Long, M. Ryan Corces +6 more

PEPATAC: An optimized pipeline for ATAC-seq data analysis with serial alignments

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.347054

N/A

0DataRank · unranked

19 citations

M. Ryan Corces, Jin Xu, Vincent Reuter, Howard Y. Chang, Nathan C. Sheffield +1 more

Transient “rest” induces functional reinvigoration and epigenetic remodeling in exhausted CAR-T cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.26.920496

N/A

0DataRank · unranked

18 citations

Rachel C. Lynn, Kevin R. Parker, Hima Anbunathan, John Lattin, Elena Sotillo +13 more

The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.16.342857

N/A

0DataRank · unranked

17 citations

Viviana I. Risca, David L. Reynolds, James Chappell, Adam J. Rubin, Namyoung Jung +11 more

KLF4 Recruits SWI/SNF to Increase Chromatin Accessibility and Reprogram the Endothelial Enhancer Landscape under Laminar Shear Stress

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.10.195768

N/A

0DataRank · unranked

15 citations

James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach +11 more

EcDNA hubs drive cooperative intermolecular oncogene expression

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.19.390278

N/A

0DataRank · unranked

15 citations

Kathryn E. Yost, Liangqi Xie, Sihan Wu, Joshua T. Lange, Connor V. Duffy +14 more

Single-cell epigenomic identification of inherited risk loci in Alzheimer’s and Parkinson’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.06.896159

N/A

0DataRank · unranked

14 citations

Anna Shcherbina, Soumya Kundu, Michael J. Gloudemans, Laure Frésard, Jeffrey M. Granja +12 more

BABEL enables cross-modality translation between multi-omic profiles at single-cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.09.375550

N/A

0DataRank · unranked

10 citations

Kathryn E. Yost, Howard Y. Chang, James Zou, Kevin Wu

Systematic reconstruction of RNA functional motifs with high-throughput microfluidics

UNC Libraries(2020)10.17615/w26h-bx52

N/A

0DataRank · unranked

0 citations

Stephen R. Quake, Lance Martin, William F. Marzluff, Shawn M. Lyons, Rene Sit +2 more

B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells

Cell(2021)10.1016/j.cell.2021.02.015

N/A

0DataRank · unranked

222 citations

Yanyan Qi, Rui Li, Quanming Shi, Ansuman T. Satpathy, Howard Y. Chang +1 more

Detecting riboSNitches with RNA folding algorithms: a genome-wide benchmark

UNC Libraries(2020)10.17615/eh6k-d336

N/A

0DataRank · unranked

0 citations

Meredith Corley, Howard Y. Chang, Alain Laederach, Amanda Solem, Kun Qu

ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis

Nature Genetics(2021)10.1038/s41588-021-00790-6

N/A

0DataRank · unranked

1478 citations

M. Ryan Corces, Sarah E. Pierce, S. Tansu Bagdatli, Hani Choudhry, Howard Y. Chang +2 more

Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing

Cell(2021)10.1016/j.cell.2021.03.025

N/A

0DataRank · unranked

760 citations

Chen Jin, Greg C. Pommier, J. Zachery Cogan, Joseph M. Replogle, Carmen Adriaens +15 more

Transient rest restores functionality in exhausted CAR-T cells through epigenetic remodeling

Science(2021)10.1126/science.aba1786

N/A

0DataRank · unranked

607 citations

Kevin R. Parker, Elena Sotillo, Rachel C. Lynn, Hima Anbunathan, John Lattin +21 more

ecDNA hubs drive cooperative intermolecular oncogene expression

Nature(2021)10.1038/s41586-021-04116-8

N/A

0DataRank · unranked

344 citations

Kathryn E. Yost, Liangqi Xie, Quanming Shi, Konstantin Helmsauer, Jens Luebeck +29 more

Structured elements drive extensive circular RNA translation

Molecular Cell(2021)10.1016/j.molcel.2021.07.042

N/A

0DataRank · unranked

327 citations

Ran Cheng, János Demeter, Jin Chen, Shira Weingarten-Gabbay, Lihua Jiang +6 more

Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions

Cell(2021)10.1016/j.cell.2021.03.012

N/A

0DataRank · unranked

219 citations

Julia A. Belk, Yanyan Qi, Yuki Yasumoto, Jin Wei, Mia Madel Alfajaro +14 more

Integrated spatial multiomics reveals fibroblast fate during tissue repair

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2110025118

N/A

0DataRank · unranked

191 citations

Michael Januszyk, Kathryn E. Yost, Malini Chinta, Gunsagar S. Gulati, Alan Nguyen +24 more

GPC2-CAR T cells tuned for low antigen density mediate potent activity against neuroblastoma without toxicity

Cancer Cell(2021)10.1016/j.ccell.2021.12.005

N/A

0DataRank · unranked

164 citations

Kristopher R. Bosse, Zhongyu Zhu, Doncho V. Zhelev, Robbie G. Majzner, Molly Radosevich +36 more

NOT-Gated CD93 CAR T Cells Effectively Target AML with Minimized Endothelial Cross-Reactivity

Blood Cancer Discovery(2021)10.1158/2643-3230.bcd-20-0208

N/A

0DataRank · unranked

93 citations

Feifei Zhao, Katherine A. Freitas, Kevin R. Parker, Peng Xu, Amy C. Fan +12 more

PEPATAC: an optimized pipeline for ATAC-seq data analysis with serial alignments

NAR Genomics and Bioinformatics(2021)10.1093/nargab/lqab101

N/A

0DataRank · unranked

84 citations

M. Ryan Corces, Jin Xu, Vincent Reuter, Howard Y. Chang, Nathan C. Sheffield +1 more

Locus specific epigenetic modalities of random allelic expression imbalance

Nature Communications(2021)10.1038/s41467-021-25630-3

N/A

0DataRank · unranked

24 citations

Benjamin Forêt, Dina Zielinski, Florian Massip, Mikaël Attia, Ava C. Carter +5 more

Chromatin accessibility associates with protein-RNA correlation in human cancer

Nature Communications(2021)10.1038/s41467-021-25872-1

N/A

0DataRank · unranked

41 citations

Joshua J. Gruber, Ahmed A. Metwally, Lihua Jiang, Warren D. Reynolds, John B. Sunwoo +5 more

Analysis of RNA conformation in endogenously assembled RNPs by icSHAPE

STAR Protocols(2021)10.1016/j.xpro.2021.100477

N/A

0DataRank · unranked

4 citations

Howard Y. Chang, Steven E. Artandi, Lü Chen

fSHAPE, fSHAPE-eCLIP, and SHAPE-eCLIP probe transcript regions that interact with specific proteins

STAR Protocols(2021)10.1016/j.xpro.2021.100762

N/A

0DataRank · unranked

1 citations

Ryan A. Flynn, Steven M. Blue, Brian A. Yee, Howard Y. Chang, G Yeo +1 more

TCR-BERT: learning the grammar of T-cell receptors for flexible antigen-xbinding analyses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.18.469186

N/A

0DataRank · unranked

68 citations

Kathryn E. Yost, Bence Dániel, Julia A. Belk, Yu Xia, Takeshi Egawa +4 more

B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.03.425167

N/A

0DataRank · unranked

24 citations

Yanyan Qi, Rui Li, Quanming Shi, Ansuman T. Satpathy, Howard Y. Chang +1 more

Divergent clonal differentiation trajectories of T cell exhaustion

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.16.472900

N/A

0DataRank · unranked

20 citations

Kathryn E. Yost, Katalin Sandor, Yu Xia, Yanyan Qi, Kamir J. Hiam-Galvez +8 more

Integrated spatial multi-omics reveals fibroblast fate during tissue repair

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.02.437928

N/A

0DataRank · unranked

16 citations

Michael Januszyk, Malini Chinta, Kathryn E. Yost, Gunsagar S. Gulati, Alan Nguyen +24 more

Principles of ecDNA random inheritance drive rapid genome change and therapy resistance in human cancers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.11.447968

N/A

0DataRank · unranked

16 citations

Celine Chen, Yuriy Pichugin, Liangqi Xie, Jun Tang, King L. Hung +14 more

Targeted profiling of human extrachromosomal DNA by CRISPR-CATCH

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.28.470285

N/A

0DataRank · unranked

13 citations

Jens Luebeck, Siavash R. Dehkordi, Ceyda Çoruh, Julie A. Law, William J. Greenleaf +4 more

The Mettl3 epitranscriptomic writer amplifies p53 stress responses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.21.465324

N/A

0DataRank · unranked

5 citations

Mengxiong Wang, José A. Seoane, Nancie A. Moonie, János Demeter, Alyssa M. Kaiser +8 more

RNA-Binding Proteins Direct Myogenic Cell Fate Decisions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.14.435333

N/A

0DataRank · unranked

4 citations

Oscar N. Whitney, Thomas O. Vogler, Éric Nguyen, Bradley Pawlikowski, Evan Lester +12 more

Locus specific epigenetic modalities of random allelic expression imbalance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.04.433808

N/A

0DataRank · unranked

2 citations

Benjamin Forêt, Dina Zielinski, Florian Massip, Mikaël Attia, Ava C. Carter +5 more

Macrophage inflammatory and regenerative response periodicity is programmed by cell cycle and chromatin state

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.24.449850

N/A

0DataRank · unranked

1 citations

Julia A. Belk, Stefanie L. Meier, Andy Y. Chen, Katalin Sandor, Yanyan Qi +8 more

A genetic bottleneck of mitochondrial DNA during human lymphocyte development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.28.462268

N/A

0DataRank · unranked

1 citations

Zhaolian Lu, Baizhen Chen, Weixing Zhang, Howard Y. Chang, Zheng Hu +2 more

Engineering circular RNA for enhanced protein production

Nature Biotechnology(2022)10.1038/s41587-022-01393-0

N/A

0DataRank · unranked

429 citations

Sean K. Wang, Julia A. Belk, Laura Amaya, Zhijian Li, Angel Cardenas +5 more

Divergent clonal differentiation trajectories of T cell exhaustion

Nature Immunology(2022)10.1038/s41590-022-01337-5

N/A

0DataRank · unranked

231 citations

Kathryn E. Yost, Sunnie Hsiung, Katalin Sandor, Yu Xia, Yanyan Qi +12 more

Multiomic analysis reveals conservation of cancer-associated fibroblast phenotypes across species and tissue of origin

Cancer Cell(2022)10.1016/j.ccell.2022.09.015

N/A

0DataRank · unranked

217 citations

Michael Januszyk, Daniel Delitto, Kathryn E. Yost, Michelle Griffin, Jason Guo +31 more

The evolutionary dynamics of extrachromosomal DNA in human cancers

Nature Genetics(2022)10.1038/s41588-022-01177-x

N/A

0DataRank · unranked

199 citations

John C. Rose, Celine Chen, Yuriy Pichugin, Liangqi Xie, Jun Tang +17 more

Enhanced T cell effector activity by targeting the Mediator kinase module

Science(2022)10.1126/science.abn5647

N/A

0DataRank · unranked

147 citations

Julia A. Belk, Elena Sotillo, Patrick J. Quinn, María C. Ramello, Meena Malipatlolla +16 more

Targeted profiling of human extrachromosomal DNA by CRISPR-CATCH

Nature Genetics(2022)10.1038/s41588-022-01190-0

N/A

0DataRank · unranked

125 citations

Jens Luebeck, Siavash R. Dehkordi, Caterina I. Colón, Rui Li, Ivy Tsz-Lo Wong +21 more

Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2201883119

N/A

0DataRank · unranked

113 citations

Kathryn E. Yost, Sedona E. Murphy, Andreas Magg, Yicheng Long, M. Ryan Corces +7 more

Epigenomic priming of immune genes implicates oligodendroglia in multiple sclerosis susceptibility

Neuron(2022)10.1016/j.neuron.2021.12.034

N/A

0DataRank · unranked

101 citations

Eneritz Agirre, Mukund Kabbe, Cassandra A. van Tuijn, Abeer Heskol, Chao Zheng +12 more

KLF4 recruits SWI/SNF to increase chromatin accessibility and reprogram the endothelial enhancer landscape under laminar shear stress

Nature Communications(2022)10.1038/s41467-022-32566-9

N/A

0DataRank · unranked

74 citations

James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach +12 more

Macrophage inflammatory and regenerative response periodicity is programmed by cell cycle and chromatin state

Molecular Cell(2022)10.1016/j.molcel.2022.11.017

N/A

0DataRank · unranked

61 citations

Julia A. Belk, Stefanie L. Meier, Andy Y. Chen, Katalin Sandor, Zsolt Czimmerer +12 more

Gene regulation on extrachromosomal DNA

Nature Structural & Molecular Biology(2022)10.1038/s41594-022-00806-7

N/A

0DataRank · unranked

54 citations

Paul S. Mischel, Howard Y. Chang, King L. Hung

The autism risk factor CHD8 is a chromatin activator in human neurons and functionally dependent on the ERK-MAPK pathway effector ELK1

Scientific Reports(2022)10.1038/s41598-022-23614-x

N/A

0DataRank · unranked

18 citations

Tamás Dankó, Soham Chanda, Pedro J. Batista, Ulrike Litzenburger, Qian Yi Lee +6 more

Oncogene Convergence in Extrachromosomal DNA Hubs

Cancer Discovery(2022)10.1158/2159-8290.cd-22-0076

N/A

0DataRank · unranked

13 citations

King L. Hung, Howard Y. Chang, Natasha E. Weiser

Inducible lncRNA transgenic mice reveal continual role of HOTAIR in promoting breast cancer metastasis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.21.488980

N/A

0DataRank · unranked

2 citations

Liuyi Yang, Karen Tolentino, Yang Zhao, Ulrike M Lizenburger, Quanming Shi +8 more

Bidirectional epigenetic editing reveals hierarchies in gene regulation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.15.516658

N/A

0DataRank · unranked

2 citations

Quanming Shi, Kevin R. Parker, Howard Y. Chang, Naomi M. Pacalin

Enhanced Effector Activity of Mediator Kinase Module Deficient CAR-T Cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.02.506235

N/A

0DataRank · unranked

0 citations

Julia A. Belk, Elena Sotillo, Bence Dániel, Katalin Sandor, Dorota D. Klysz +12 more

Capsid-mediated chromatin state of the AAV vector genome controls host species range

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.06.511169

N/A

0DataRank · unranked

0 citations

Shinnosuke Tsuji, Feijie Zhang, King L. Hung, Howard Y. Chang, Katja Pekrun +2 more

Spatial organization of the 3D genome encodes gene co-expression programs in single cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.26.513917

N/A

0DataRank · unranked

0 citations

Shu Zhang, Liangqi Xie, Lihua Wang, Andrew L. Lemire, Arthur D. Lander +3 more

Chromatin activity identifies differential gene regulation across human ancestries

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.25.517959

N/A

0DataRank · unranked

0 citations

Maxwell R. Mumbach, Amanda J. Lea, Julien F. Ayroles, Howard Y. Chang, Maya Kasowski +2 more

Author response: Inducible lncRNA transgenic mice reveal continual role of HOTAIR in promoting breast cancer metastasis

(2022)10.7554/elife.79126.sa2

N/A

0DataRank · unranked

0 citations

Liuyi Yang, Karen Tolentino, Guiping Wang, Yang Zhao, Ulrike Litzenburger +13 more

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