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ODGI: understanding pangenome graphs

Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

ODGI: understanding pangenome graphs

Bioinformatics(2022)10.1093/bioinformatics/btac308Source: DataRank Database

ODGI: understanding pangenome graphs is a research paper published in Bioinformatics (2022). On theSindex it has a DataRank of 3.8. It has been cited 211 times, with 156 citing works in its 1-hop citation network.

N/A

3.8DataRank · unranked

Scored on demand from live citation data

Open Access211 citations · 156 citing works in its network

Cite:

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (17 grants)Impact (FWCI 14.57)OA: hybridTopics (19)IDs (PubMed, PMC, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

FFindable (1/2)

Has DOI

AAccessible (1/2)

Open Access

IInteroperable (0/2)

RReusable (0/3)

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

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DataRank Breakdown

Base Score 21%Citation Network 79%

Base Score Contribution

0.803

From this paper's citation signal

Citation Network Contribution

3.0

From 109 citing papers with measurable signal

Learn more about DataRank methodology →

Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 156 citers.

Interactive visualization and interpretation of pangenome graphs by linear reference–based coordinate projection and annotation integration
Genome Research20257 citations12 referencesContributes 0.173
Storing and analyzing a genome on a blockchain
Genome biology202239 citations24 referencesContributes 0.154
Comparing methods for constructing and representing human pangenome graphs
Genome biology202356 citations32 referencesContributes 0.126
Vizitig: a pangenome and pantranscriptome explorer
bioRxiv (Cold Spring Harbor Laboratory)20253 citations14 referencesContributes 0.099
Gretl—variation GRaph Evaluation TooLkit
Bioinformatics20244 citations17 referencesContributes 0.095

Authors (5)

Simon Heumos ORCID,Sven Nahnsen ORCID,Pjotr Prins ORCID,Erik Garrison ORCID,Andrea Guarracino ORCID

Live enrichment

PubMed:35552372 PMC:PMC9237687 OpenAlex:https://openalex.org/W4280583823

National Institutes of Health

Grant: NIDA U01DA047638

NIGMS

Grant: R01GM123489

NSF PPoSS

Grant: #2118709

German Network for Bioinformatics Infrastructure

Grant: 031A537B

German Network for Bioinformatics Infrastructure

Grant: 031A533A

German Network for Bioinformatics Infrastructure

Grant: 031A538A

German Network for Bioinformatics Infrastructure

Grant: 031A533B

German Network for Bioinformatics Infrastructure

Grant: 031A535A

German Network for Bioinformatics Infrastructure

Grant: 031A537C

German Network for Bioinformatics Infrastructure

Grant: 031A534A

German Network for Bioinformatics Infrastructure

Grant: 031A532B

NIDA NIH HHS

Grant: U01 DA047638

National Science Foundation

Grant: 2118709

Collaborative Research: PPoSS: LARGE: Panorama: Integrated Rack-Scale Acceleration for Computational Pangenomics

National Institutes of Health

Grant: 5U01DA047638-05

System genetics of menthol and nicotine addiction

National Institutes of Health

Grant: 1R01GM123489-01A1

A Unified High Performance Web Service for Systems Genetics and Precision Medicine

Federal Ministry for Economic Affairs and Energy of Germany

BMBF

FWCI

14.57

Citation Percentile

1.0%

Citation Trend

2022

2023

2024

2025

2026

hybridLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/38/13/3319/44268769/btac308.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/38/13/3319/44268769/btac308.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btac308/43882774/btac308.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/38/13/3319/49883779/btac308.pdf

journalhttps://doi.org/10.1093/bioinformatics/btac308

Fields of Study

Genomics and Phylogenetic StudiesGenome Rearrangement AlgorithmsGenomics and Rare Diseases0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technology

MeSH Terms

AlgorithmsDocumentationSoftwareGenomeGenomics

Keywords

Computer scienceGenomeGenomicsDocumentationOriginal PapersSoftwareAlgorithms

Sustainable Development Goals

SDG 0: Partnerships for the goals

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