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Nevan J. Krogan

Nevan J. Krogan

University of California, San Francisco

ORCID: 0000-0003-4902-337X

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.889Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A Perturbation Cell Atlas of Human Induced Pluripotent Stem Cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.03.621734

Top 42%

0.447DataRank

Top 42%8 citations

Yesh Doctor, Amir Dailamy, Antoine Forget, Yi-Hung Lee, Becky Chinn +18 more

Papers

Driven by 197 papers — median percentile 58. Top paper: “Evaluation of SARS-CoV-2 serology assays reveals a range of test performance”.

Evaluation of SARS-CoV-2 serology assays reveals a range of test performance

Nature Biotechnology(2020)10.1038/s41587-020-0659-0

N/A

15.0DataRank · unranked

299 citations

Joseph Hiatt, Cody T. Mowery, Brian R. Shy, Ruby Yu, Tori N. Yamamoto +67 more

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.22.002386

N/A

14.3DataRank · unranked

456 citations

Gwendolyn M. Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Matthew J. O’Meara +95 more

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

Cell(2020)10.1016/j.cell.2020.06.034

N/A

10.3DataRank · unranked

1152 citations

Danish Memon, Bjoern Meyer, Kris M. White, Veronica V. Rezelj, Miguel Correa Marrero +73 more

An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike

Science(2020)10.1126/science.abe3255

N/A

9.7DataRank · unranked

468 citations

Bryan Faust, Reuben A. Saunders, Smriti Sangwan, Veronica V. Rezelj, Nick Hoppe +68 more

Plitidepsin has potent preclinical efficacy against SARS-CoV-2 by targeting the host protein eEF1A

Science(2021)10.1126/science.abf4058

N/A

9.0DataRank · unranked

365 citations

Romel Rosales, Soner Yildiz, Thomas Kehrer, Lisa Miorin, Elena Moreno +21 more

Mutations in SARS-CoV-2 variants of concern link to increased spike cleavage and virus transmission

Cell Host & Microbe(2022)10.1016/j.chom.2022.01.006

N/A

5.8DataRank · unranked

197 citations

Ana S. Gonzalez‐Reiche, Sadaf Aslam, Ignacio Mena, Manon Laporte, Rebecca L. Pearl +24 more

Tau interactome maps synaptic and mitochondrial processes associated with neurodegeneration

Cell(2022)10.1016/j.cell.2021.12.041

N/A

5.7DataRank · unranked

346 citations

Jesús Madero‐Pérez, Danielle L. Swaney, Timothy S. Chang, Michelle Moritz, Csaba Konràd +25 more

Evolution of enhanced innate immune evasion by the SARS-CoV-2 B.1.1.7 UK variant

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.06.446826

N/A

5.0DataRank · unranked

107 citations

Mehdi Bouhaddou, Ann‐Kathrin Reuschl, Lorena Zuliani‐Alvarez, Benjamin J. Polacco, Adrian Pelin +28 more

The AMBRA1 E3 ligase adaptor regulates the stability of cyclin D

Nature(2021)10.1038/s41586-021-03474-7

N/A

4.5DataRank · unranked

168 citations

Chuan Li, Edwin E. Jeng, Samuel Loebell, Myung Chang Lee, Christopher W. Murray +25 more

The Landscape of Human Cancer Proteins Targeted by SARS-CoV-2

Cancer Discovery(2020)10.1158/2159-8290.cd-20-0559

N/A

2.4DataRank · unranked

63 citations

Merve Çakır, Jyoti Batra, Mehdi Bouhaddou, Manon Eckhardt, David E. Gordon +2 more

Host-directed therapies against early-lineage SARS-CoV-2 retain efficacy against B.1.1.7 variant

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.24.427991

N/A

2.4DataRank · unranked

42 citations

Lucy G. Thorne, Lorena Zuliani‐Alvarez, Mehdi Bouhaddou, Kirsten Obernier, Joseph Hiatt +18 more

Interpretation of cancer mutations using a multiscale map of protein systems

Science(2021)10.1126/science.abf3067

N/A

2.1DataRank · unranked

88 citations

Marcus R. Kelly, Dana J. Ramms, Marissa L. Heintschel, Kai Tao, Beril Tutuncuoglu +27 more

SARS-CoV-2 variants evolve convergent strategies to remodel the host response

Cell(2023)10.1016/j.cell.2023.08.026

N/A

2.1DataRank · unranked

113 citations

Ann-Kathrin Reuschl, Benjamin J. Polacco, Lucy G. Thorne, Manisha R. Ummadi, Chengjin Ye +88 more

Fibrin drives thromboinflammation and neuropathology in COVID-19

Nature(2024)10.1038/s41586-024-07873-4

N/A

2.0DataRank · unranked

99 citations

Zhaoqi Yan, Mauricio Montaño, Elif G. Sözmen, Karuna Dixit, Rahul K. Suryawanshi +39 more

An ultra-potent synthetic nanobody neutralizes SARS-CoV-2 by locking Spike into an inactive conformation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.08.238469

N/A

2.0DataRank · unranked

49 citations

Bryan Faust, Reuben A. Saunders, Smriti Sangwan, Veronica V. Rezelj, Nick Hoppe +51 more

Dynamic post-translational modification profiling of Mycobacterium tuberculosis-infected primary macrophages

eLife(2020)10.7554/elife.51461

N/A

1.9DataRank · unranked

69 citations

Danielle L. Swaney, David Jimenez‐Morales, Jeffrey R. Johnson, Nicholas E. Garelis, Teresa Repasy +8 more

Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution

Virology(2021)10.1016/j.virol.2021.02.013

N/A

1.6DataRank · unranked

51 citations

Chase W. Nelson, Zachary Ardern, Yaara Finkel, Nevan J. Krogan, Kei Sato +8 more

Structural basis of CD4 downregulation by HIV-1 Nef

Nature Structural & Molecular Biology(2020)10.1038/s41594-020-0463-z

N/A

1.6DataRank · unranked

66 citations

Robyn M. Kaake, Ignacia Echeverria, Marissa Suarez, Mohammad Karimian Shamsabadi, Charlotte A. Stoneham +8 more

Proteomic Approaches to Study SARS-CoV-2 Biology and COVID-19 Pathology

Journal of Proteome Research(2021)10.1021/acs.jproteome.0c00764

N/A

1.4DataRank · unranked

38 citations

Monita Muralidharan, Nevan J. Krogan, Robyn M. Kaake, Ruth Hüttenhain, Paige Haas

Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets

Nature Communications(2023)10.1038/s41467-023-41442-z

N/A

1.2DataRank · unranked

62 citations

Michael McGregor, Mehdi Bouhaddou, Benjamin J. Polacco, Eun‐Young Kim, Thông Nguyen +50 more

A functional map of HIV-host interactions in primary human T cells

Nature Communications(2022)10.1038/s41467-022-29346-w

N/A

1.2DataRank · unranked

52 citations

Judd F. Hultquist, Michael McGregor, Mehdi Bouhaddou, Ryan T. Leenay, Lacy M. Simons +17 more

Preclinical and randomized phase I studies of plitidepsin in adults hospitalized with COVID-19

Life Science Alliance(2022)10.26508/lsa.202101200

N/A

1.2DataRank · unranked

52 citations

Pedro Landete, José A. López-Martín, Vicente Estrada, Roger Paredes, Pablo Guisado‐Vasco +46 more

Genetic interaction mapping informs integrative structure determination of protein complexes

Science(2020)10.1126/science.aaz4910

N/A

1.1DataRank · unranked

36 citations

Ignacia Echeverria, Stefan Bohn, Peter Cimermančič, Anthony L. Shiver, Richard Alexander +23 more

Target Discovery for Host-Directed Antiviral Therapies: Application of Proteomics Approaches

mSystems(2021)10.1128/msystems.00388-21

N/A

1.1DataRank · unranked

38 citations

Kirsten Obernier, Antoine Forget, Nevan J. Krogan, Merve Çakır

Viral E protein neutralizes BET protein-mediated post-entry antagonism of SARS-CoV-2

Cell Reports(2022)10.1016/j.celrep.2022.111088

N/A

1.1DataRank · unranked

25 citations

James E. Longbotham, Sarah McMahon, Rahul K. Suryawanshi, Mir M. Khalid, Taha Y. Taha +17 more

A Quantitative Genetic Interaction Map of HIV Infection

Molecular Cell(2020)10.1016/j.molcel.2020.02.004

N/A

0.978DataRank · unranked

32 citations

Ariane Watson, Assen Roguev, Simin Zheng, Gwendolyn M. Jang, Joshua Kane +14 more

Systems-level effects of allosteric perturbations to a model molecular switch

Nature(2021)10.1038/s41586-021-03982-6

N/A

0.972DataRank · unranked

26 citations

Christopher J.P. Mathy, Jiewei Xu, Gwendolyn M. Jang, Yang Zhang, Robyn M. Kaake +8 more

Targeting a lineage-specific PI3Kɣ–Akt signaling module in acute myeloid leukemia using a heterobifunctional degrader molecule

Nature Cancer(2024)10.1038/s43018-024-00782-5

N/A

0.962DataRank · unranked

26 citations

Justine C. Rutter, Kevin Lin, Frank Ling, Matthieu Duchmann, Emmanuelle Latour +30 more

Evolution of enhanced innate immune evasion by SARS-CoV-2

Nature(2021)10.1038/s41586-021-04352-y

N/A

0.900DataRank · unranked

402 citations

Mehdi Bouhaddou, Ann-Kathrin Reuschl, Lorena Zuliani-Alvarez, Benjamin J. Polacco, Adrian Pelin +41 more

Resistance to ATR Inhibitors Is Mediated by Loss of the Nonsense-Mediated Decay Factor UPF2

Cancer Research(2022)10.1158/0008-5472.can-21-4335

N/A

0.884DataRank · unranked

28 citations

Huadong Chen, Yagmur U. Doruk, Tess Williamson, Benjamin J. Polacco, Andrew S. McNeal +13 more

Profiling the proximal proteome of the activated μ-opioid receptor

Nature Chemical Biology(2024)10.1038/s41589-024-01588-3

N/A

0.862DataRank · unranked

34 citations

Braden T. Lobingier, Emily E. Blythe, Nohely Abreu, Prachi Khare, Matthew K. Howard +12 more

CryoEM and AI reveal a structure of SARS-CoV-2 Nsp2, a multifunctional protein involved in key host processes

Research Square(2021)10.21203/rs.3.rs-515215/v1

N/A

0.796DataRank · unranked

17 citations

Meghna Gupta, Caleigh M. Azumaya, Michelle Moritz, Sergei Pourmal, Amy Diallo +75 more

Caveolin-1 and Sox-2 are predictive biomarkers of cetuximab response in head and neck cancer

JCI Insight(2021)10.1172/jci.insight.151982

N/A

0.791DataRank · unranked

19 citations

Rex H. Lee, Hua Li, Neil E. Bhola, Rachel A. O’Keefe, Mohammad Naser +16 more

Oncogenic PKA signaling increases c-MYC protein expression through multiple targetable mechanisms

eLife(2023)10.7554/elife.69521

N/A

0.725DataRank · unranked

32 citations

Samantha Maisel, Yeonjoo Hwang, Bryan C Pascual, Rebecca RB Wolber, Phuong Vu +15 more

A multi-scale map of protein assemblies in the DNA damage response

Cell Systems(2023)10.1016/j.cels.2023.04.007

N/A

0.682DataRank · unranked

40 citations

Minkyu Kim, Marcus R. Kelly, Fan Zheng, Christopher A. Koczor, Jianfeng Li +14 more

Impact of SARS-CoV-2 ORF6 and its variant polymorphisms on host responses and viral pathogenesis

Cell Host & Microbe(2023)10.1016/j.chom.2023.08.003

N/A

0.655DataRank · unranked

78 citations

Anastasija Čupić, Chengjin Ye, Soner Yildiz, Mehdi Bouhaddou, Nicholas A. Crossland +35 more

SARS-CoV-2 evolution balances conflicting roles of N protein phosphorylation

PLoS Pathogens(2024)10.1371/journal.ppat.1012741

N/A

0.655DataRank · unranked

24 citations

Alison Ciling, Irene P. Chen, Christopher R. Carlson, Armin N. Adly, Hannah S. Martin +11 more

Structure-function analysis of enterovirus protease 2A in complex with its essential host factor SETD3

Nature Communications(2022)10.1038/s41467-022-32758-3

N/A

0.612DataRank · unranked

9 citations

Ursula Schulze‐Gahmen, Manon Eckhardt, Gwendolyn M. Jang, Jiewei Xu, Ernst H. Pulido +9 more

Global landscape of the host response to SARS-CoV-2 variants reveals viral evolutionary trajectories

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.19.512927

N/A

0.524DataRank · unranked

14 citations

Ann‐Kathrin Reuschl, Benjamin J. Polacco, Lucy G. Thorne, Manisha R. Ummadi, Chengjin Ye +72 more

Efficient Generation of Isogenic Primary Human Myeloid Cells using CRISPR-Cas9 Ribonucleoproteins

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.13.991414

N/A

0.498DataRank · unranked

7 citations

Devin A. Cavero, Michael McGregor, David E. Gordon, Weihao Zheng, Jonathan M. Budzik +14 more

A proximity proteomics pipeline with improved reproducibility and throughput

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.11.536358

N/A

0.486DataRank · unranked

12 citations

Qiongyu Li, Benjamin J. Polacco, Trupti Patil, Aaron Marley, Helene Foussard +10 more

A Perturbation Cell Atlas of Human Induced Pluripotent Stem Cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.03.621734

Top 42%

0.447DataRank

Top 42%8 citations

Yesh Doctor, Amir Dailamy, Antoine Forget, Yi-Hung Lee, Becky Chinn +18 more

Cell Maps for Artificial Intelligence: AI-Ready Maps of Human Cell Architecture from Disease-Relevant Cell Lines

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.21.589311

Top 42%

0.442DataRank

Top 42%13 citations

Jillian Mohan, Leah V. Schaffer, Kirsten Obernier, Sadnan Al Manir, Christopher Churas +28 more

A Legionella toxin mimics tRNA and glycosylates the translation machinery to trigger a ribotoxic stress response

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.10.495705

N/A

0.392DataRank · unranked

4 citations

Lan Wang, Tom Moss, Mark Voorhies, Smriti Sangwan, Erica Stevenson +9 more

Quantitative Proteomic Analysis Reveals apoE4-Dependent Phosphorylation of the Actin-Regulating Protein VASP

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100541

N/A

0.381DataRank · unranked

10 citations

Samuel J. Lord, Yuan Zhou, Gwendolyn M. Jang, Benjamin J. Polacco, Manon Eckhardt +10 more

CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells

mBio(2024)10.1128/mbio.02222-23

N/A

0.351DataRank · unranked

8 citations

Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M. Haas, Mehdi Bouhaddou +16 more

Conflicting and Ambiguous Names of Overlapping ORFs in SARS-CoV-2: A Homology-Based Resolution

Preprints.org(2020)10.20944/preprints202012.0048.v1

N/A

0.327DataRank · unranked

5 citations

Chase W. Nelson, Zachary Ardern, Yaara Finkel, Nevan J. Krogan, Kei Sato +8 more

MerlinS13 phosphorylation regulates meningioma Wnt signaling and magnetic resonance imaging features

Nature Communications(2024)10.1038/s41467-024-52284-8

N/A

0.290DataRank · unranked

5 citations

Lauro N. Avalos, Siyuan Liu, Zhenhong Chen, Naomi Zakimi, Tim Casey-Clyde +12 more

Bimodal evolution of Src and Abl kinase substrate specificity revealed using mammalian cell extract as substrate pool

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.12.248104

N/A

0.286DataRank · unranked

4 citations

Margaret Soucheray, Christopher Wilson, Renee Otten, Vanessa Buosi, Nevan J. Krogan +4 more

Low expression of EXOSC2 protects against clinical COVID-19 and impedes SARS-CoV-2 replication

Life Science Alliance(2022)10.26508/lsa.202201449

N/A

0.284DataRank · unranked

4 citations

Valerie Odon, Calum Harvey, Mark O. Collins, Andrew A. Peden, John Franklin +15 more

Epigenetic reprogramming shapes the cellular landscape of schwannoma

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.23.521842

N/A

0.282DataRank · unranked

3 citations

Tim Casey-Clyde, Nam Woo Cho, Jason Swinderman, Melike Pekmezci, Mark C. Dougherty +28 more

Fate of telomere entanglements is dictated by the timing of anaphase midregion nuclear envelope breakdown

Nature Communications(2024)10.1038/s41467-024-48382-2

N/A

0.232DataRank · unranked

3 citations

Raquel Ortega, Nevan J. Krogan, Julia Promisel Cooper, Rishi Kumar Nageshan

Protein interaction map of APOBEC3 enzyme family reveals deamination-independent role in cellular function

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.06.579137

N/A

0.225DataRank · unranked

3 citations

Arun Kumar Annan Sudarsan, Arzhang Shayeganmehr, Érika Prando Munhoz, R. Lao, Amit Gaba +8 more

HBV Remodels PP2A Complexes to Rewire Kinase Signaling in Hepatocellular Carcinoma

Cancer Research(2024)10.1158/0008-5472.can-24-0456

N/A

0.218DataRank · unranked

3 citations

Adriana Pitea, Gwendolyn M. Jang, Zhong Xu, Huat Chye Lim, Alex L. Choi +22 more

Current proteomics methods applicable to dissecting the DNA damage response

NAR Cancer(2023)10.1093/narcan/zcad020

N/A

0.218DataRank · unranked

3 citations

Nevan J. Krogan, Mehdi Bouhaddou, Minkyu Kim, Monita Muralidharan

Inference of differential kinase interaction networks with KINference

Bioinformatics(2025)10.1093/bioinformatics/btaf349

N/A

0.208DataRank · unranked

3 citations

Nevan J. Krogan, Benjamin J. Polacco, David B. Blumenthal, Nicolai Meyerhöfer

Lessons learned for pandemic preparedness: A collaborative network is imperative

Cell Host & Microbe(2023)10.1016/j.chom.2023.05.008

N/A

0.201DataRank · unranked

2 citations

Nevan J. Krogan, Jacqueline M. Fabius

Structural insights into regulation of the PEAK3 pseudokinase scaffold by 14-3-3

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.01.506268

N/A

0.193DataRank · unranked

2 citations

Michael Paul, Antoine Forget, Megan Lo, Devan Diwanji, Krzysztof Pawłowski +4 more

Selective RNA sequestration in biomolecular condensates directs cell fate transitions

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.08.652299

N/A

0.177DataRank · unranked

2 citations

Mika Nevo, Junchao Shi, Srikanth Kodali, Eduard Casas, Yingzhi Cui +12 more

The Chlamydia trachomatis Inc Tri1 interacts with TRAF7 to displace native TRAF7 interacting partners

Microbiology Spectrum(2024)10.1128/spectrum.00453-24

N/A

0.171DataRank · unranked

2 citations

Eleanor McMahon, Danielle L. Swaney, Jessica Sherry, Khavong Pha, Kathleen Adams-Boone +7 more

Structure-function analysis of enterovirus protease 2A in complex with its essential host factor SETD3

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.22.497068

N/A

0.165DataRank · unranked

2 citations

Ursula Schulze‐Gahmen, Manon Eckhardt, Gwendolyn M. Jang, Jiewei Xu, Ernst H. Pulido +7 more

Cross-family small GTPase ubiquitination by the intracellular pathogen Legionella pneumophila

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.03.551750

N/A

0.129DataRank · unranked

1 citations

Varun Bhadkamkar, David Jimenez‐Morales, Erica Stevenson, Gwendolyn M. Jang, Nevan J. Krogan +3 more

The kinase Isr1 negatively regulates hexosamine biosynthesis in S. cerevisiae

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.22.055699

N/A

0.124DataRank · unranked

1 citations

Erica Stevenson, Nevan J. Krogan, Danielle L. Swaney, David P. Toczyski, Emma B. Alme

The Mac1 ADP-ribosylhydrolase is a therapeutic target for SARS-CoV-2

eLife(2025)10.7554/elife.103484.3

N/A

0.104DataRank · unranked

1 citations

Priyadarshini Jaishankar, G.J. Correy, Moira Rachman, Patrick C. O’Leary, Taha Y. Taha +26 more

From systems to structure — using genetic data to model protein structures

Nature Reviews Genetics(2022)10.1038/s41576-021-00441-w

N/A

0DataRank · unranked

34 citations

Ignacia Echeverria, Robyn M. Kaake, Andrej Săli, Nevan J. Krogan, Hannes Braberg

SIRT5 is a proviral factor that interacts with SARS-CoV-2 Nsp14 protein

PLoS Pathogens(2022)10.1371/journal.ppat.1010811

N/A

0DataRank · unranked

33 citations

Irene P. Chen, Albert Vallejo-Gracia, Ik-Jung Kim, Olga Bielska, Victor L. Lam +11 more

Global post-translational modification profiling of HIV-1-infected cells reveals mechanisms of host cellular pathway remodeling

Cell Reports(2022)10.1016/j.celrep.2022.110690

N/A

0DataRank · unranked

32 citations

David C. Crosby, Judd F. Hultquist, Andrew P. Kurland, Prithy Adhikary, Donna Li +16 more

Reduced endosomal microautophagy activity in aging associates with enhanced exocyst‐mediated protein secretion

Aging Cell(2022)10.1111/acel.13713

N/A

0DataRank · unranked

31 citations

Antonio Díaz, Maryam Jafari, Rabia R. Khawaja, Esperanza Agulló-Pascual, Olaya Santiago‐Fernández +15 more

The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity

The Journal of Cell Biology(2022)10.1083/jcb.202010065

N/A

0DataRank · unranked

18 citations

Farbod Shavarebi, Molly FitzGibbon, Elizabeth M. Earley, Hannah Ahrendt, Lotus Lum +22 more

Leveraging modeling and simulation to optimize the therapeutic window for epigenetic modifier drugs

Pharmacology & Therapeutics(2022)10.1016/j.pharmthera.2022.108162

N/A

0DataRank · unranked

7 citations

Arthur J. Van De Vyver, Yu Li, Marc R. Birtwistle, Nevan J. Krogan, Mehdi Bouhaddou +1 more

Integrative structure determination of histones H3 and H4 using genetic interactions

FEBS Journal(2022)10.1111/febs.16435

N/A

0DataRank · unranked

5 citations

Hannes Braberg, Nevan J. Krogan, Andrej Săli, Ignacia Echeverria

SIRT5 is a proviral factor that interacts with SARS-CoV-2 Nsp14 protein

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.04.474979

N/A

0DataRank · unranked

16 citations

Irene P. Chen, Albert Vallejo-Gracia, Ik-Jung Kim, Olga Bielska, Victor L. Lam +9 more

Chlamydia trachomatis effector Dre1 interacts with dynactin to reposition host organelles during infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.15.488217

N/A

0DataRank · unranked

10 citations

Lee Dolat, Eleanor McMahon, Danielle L. Swaney, Robert J. Bastidas, Jeffrey R. Johnson +5 more

Profiling the proximal proteome of the mu opioid receptor identifies novel regulators of receptor signaling and trafficking

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.28.486115

N/A

0DataRank · unranked

8 citations

Braden T. Lobingier, Emily E. Blythe, Nohely Abreu, Prachi Khare, Matthew K. Howard +12 more

De novo protein identification in mammalian sperm using high-resolution in situ cryo-electron tomography

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.28.510016

N/A

0DataRank · unranked

4 citations

Momoko Shiozaki, Kelsey M. Haas, Shumei Zhao, Caiying Guo, Benjamin J. Polacco +6 more

Low expression of EXOSC2 protects against clinical COVID-19 and impedes SARS-CoV-2 replication

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.06.483172

N/A

0DataRank · unranked

2 citations

Valerie Odon, Calum Harvey, Mark O. Collins, Andrew A. Peden, John Franklin +13 more

Deficiency in Galectin-3, -8, and -9 impairs immunity to chronic Mycobacterium tuberculosis infection but not acute infection with multiple intracellular pathogens

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.29.522180

N/A

0DataRank · unranked

0 citations

J. Carl Craft, Rafael Rivera‐Lugo, Jeffery R. Johnson, Guillaume Golovkine, Claire E. Dodd +13 more

Defining blood-induced microglia functions in neurodegeneration through multiomic profiling

Nature Immunology(2023)10.1038/s41590-023-01522-0

N/A

0DataRank · unranked

127 citations

Zhaoqi Yan, Karuna Dixit, Jeffrey R. Johnson, Mehdi Bouhaddou, Anke Meyer‐Franke +16 more

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The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.336578

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0DataRank · unranked

2 citations

Farbod Shavarebi, Molly FitzGibbon, Elizabeth M. Earley, Hannah Ahrendt, Lotus Lum +22 more

Biophysical basis of cellular multi-specificity encoded in a model molecular switch

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.04.893909

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UNC Libraries(2020)10.17615/53tg-7y64

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UNC Libraries(2020)10.17615/cm14-ej49

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RNA Polymerase II Carboxyl-terminal Domain Phosphorylation Regulates Protein Stability of the Set2 Methyltransferase and Histone H3 Di- and Trimethylation at Lysine 36

UNC Libraries(2020)10.17615/2362-rp14

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0 citations

Stephen M. Fuchs, Hannes Braberg, Nevan J. Krogan, Kelby O. Kizer, Brian D. Strahl

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Cell(2021)10.1016/j.cell.2021.03.048

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Science(2021)10.1126/science.abi4708

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Molecular Systems Biology(2021)10.15252/msb.20188792

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Ryo Higuchi‐Sanabria, Greg A. Timblin, Breanna Ford, Carlos Garzón-Coral, Catherine P. Schneider +22 more

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Current Biology(2021)10.1016/j.cub.2021.05.067

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M. Elise Lauterbur, Raymond Tobler, Christian D. Huber, Angad Johar, Shayli Varasteh Moradi +5 more

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PLoS Biology(2021)10.1371/journal.pbio.3001191

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Journal of Clinical Investigation(2021)10.1172/jci150335

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60 citations

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Nature Microbiology(2021)10.1038/s41564-021-00964-2

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Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.100907

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The Journal of Cell Biology(2021)10.1083/jcb.202011133

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Cell Reports(2021)10.1016/j.celrep.2021.109105

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Cell Reports(2021)10.1016/j.celrep.2021.109742

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Journal of Virology(2021)10.1128/jvi.02393-20

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Molecular Cell(2021)10.1016/j.molcel.2021.04.027

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23 citations

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The EMBO Journal(2021)10.15252/embj.2020105658

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20 citations

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Characterization of an A3G-VifHIV-1-CRL5-CBFβ Structure Using a Cross-linking Mass Spectrometry Pipeline for Integrative Modeling of Host–Pathogen Complexes

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100132

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11 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.10.443524

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Caleigh M. Azumaya, Michelle Moritz, Sergei Pourmal, Amy Diallo, Gregory E. Merz +75 more

Phospholipidosis is a shared mechanism underlying the in vitro antiviral activity of many repurposed drugs against SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.23.436648

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6 citations

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Endosomal cAMP production broadly impacts the cellular phosphoproteome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.06.425636

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4 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.01.433418

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Viral E Protein Neutralizes BET Protein-Mediated Post-Entry Antagonism of SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.14.468537

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4 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.05.423837

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2 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.06.463213

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2 citations

Luke M. Judge, Christina L Jensen, Kenneth Wu, Annie Truong, Jaclyn J. Ho +11 more

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.17.448349

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1 citations

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bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.26.465357

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1 citations

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Comparative Analysis of T Cell Spatial Proteomics and the Influence of HIV Expression

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.17.435902

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0 citations

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H2B Ubiquitylation Acts as a Barrier to Ctk1 Nucleosomal Recruitment Prior to Removal by Ubp8 within a SAGA-Related Complex

UNC Libraries(2021)10.17615/5gjr-1h75

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Cotranscriptional Set2 Methylation of Histone H3 Lysine 36 Recruits a Repressive Rpd3 Complex

UNC Libraries(2021)10.17615/97ha-3103

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0 citations

Maya Schuldiner, Stephen Buratowski, Natalie Thompson, Jonathan S. Weissman, S. Ahn +14 more

BUR Kinase Selectively Regulates H3 K4 Trimethylation and H2B Ubiquitylation through Recruitment of the PAF Elongation Complex

UNC Libraries(2021)10.17615/qvtc-7672

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Nevan J. Krogan, R. Nicholas Laribee, Tiaojiang Xiao, Jack Greenblatt, Yoichiro Shibata +2 more

Meningioma DNA methylation groups identify biological drivers and therapeutic vulnerabilities

Nature Genetics(2022)10.1038/s41588-022-01061-8

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306 citations

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Transcription factor protein interactomes reveal genetic determinants in heart disease

Cell(2022)10.1016/j.cell.2022.01.021

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89 citations

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Cell Reports(2022)10.1016/j.celrep.2022.110434

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36 citations

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