Theo K. Bammler

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.7Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genome-wide analyses characterize shared heritability among cancers and identify novel cancer susceptibility regions

JNCI Journal of the National Cancer Institute(2023)10.1093/jnci/djad043

Top 25%

0.804DataRank

Top 25%33 citations

Lu Wang, Helian Feng, Arunabha Majumdar, Sijia Huo, James W. MacDonald +56 more

Papers

Driven by 57 papers — median percentile 58. Top paper: “Evolution of natural lifespan variation and molecular strategies of extended lifespan in yeast”.

Evolution of natural lifespan variation and molecular strategies of extended lifespan in yeast

eLife(2021)10.7554/elife.64860

N/A

0.876DataRank · unranked

31 citations

Cheryl Zi Jin Phua, Mitchell Lee, Lu Wang, Alexander Tyshkovskiy, Siming Ma +11 more

Genome-wide analyses characterize shared heritability among cancers and identify novel cancer susceptibility regions

JNCI Journal of the National Cancer Institute(2023)10.1093/jnci/djad043

Top 25%

0.804DataRank

Top 25%33 citations

Lu Wang, Helian Feng, Arunabha Majumdar, Sijia Huo, James W. MacDonald +56 more

Transcriptome data of temporal and cingulate cortex in the Rett syndrome brain

Scientific Data(2020)10.1038/s41597-020-0527-2

Top 38%

0.505DataRank

Top 38%17 citations

Andrew E. Timms, James W. MacDonald, Hanna K. McNamara, Jennifer Herstein, Theo K. Bammler +4 more

A genome scale transcriptional regulatory model of the human placenta

Science Advances(2024)10.1126/sciadv.adf3411

Top 39%

0.489DataRank

Top 39%18 citations

Kylia Ahuna, Yeon Mi Hwang, Jocelynn R. Pearl, Hanna Liao, Paul Shannon +21 more

Genome Report: chromosome-scale genome assembly of the African spiny mouse (Acomys cahirinus)

G3 Genes Genomes Genetics(2023)10.1093/g3journal/jkad177

Top 44%

0.421DataRank

Top 44%7 citations

Vahid Nikoonejad Fard, Bernard Kim, Sarah Collins, Miranda Galey, Branden R. Nelson +14 more

GENOME REPORT: Chromosome-scale genome assembly of the African spiny mouse ( Acomys cahirinus )

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.03.535372

Top 57%

0.279DataRank

Top 57%4 citations

Vahid Nikoonejad Fard, Bernard Kim, Sarah Collins, Miranda Galey, Branden R. Nelson +14 more

A Genome Scale Transcriptional Regulatory Model of the Human Placenta

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.27.509541

Top 70%

0.165DataRank

Top 70%2 citations

Kylia Ahuna, Yeon Mi Hwang, Jocelynn R. Pearl, Hanna Liao, Paul Shannon +21 more

Associations between maternal plasma concentrations of corticotrophin releasing hormone and the placental transcriptome

Placenta(2024)10.1016/j.placenta.2024.12.021

N/A

0.104DataRank · unranked

1 citations

Mariana Parenti, Samantha Lapehn, Chaini Konwar, Leena Kadam, Evan J. Firsick +17 more

Whole genome methylation and transcriptome analyses to identify risk for cerebral palsy (CP) in extremely low gestational age neonates (ELGAN)

Scientific Reports(2021)10.1038/s41598-021-84214-9

N/A

0DataRank · unranked

15 citations

Theo K. Bammler, James W. MacDonald, Krystle Perez, Bryan A. Comstock, Sandra E. Juul +1 more

Key hepatic metabolic pathways are altered in germ-free mice during pregnancy

PLoS ONE(2021)10.1371/journal.pone.0248351

N/A

0DataRank · unranked

15 citations

Yuanyuan Shi, Alison G. Paquette, Lu Wang, Theo K. Bammler, Qingcheng Mao +1 more

Antisense oligonucleotide development for the selective modulation of CYP3A5 in renal disease

Scientific Reports(2021)10.1038/s41598-021-84194-w

N/A

0DataRank · unranked

13 citations

Andrew J. Annalora, Marija Jozic, Daniel J. Elson, Lu Wang, Theo K. Bammler +7 more

Author Correction: Antisense oligonucleotide development for the selective modulation of CYP3A5 in renal disease

Scientific Reports(2021)10.1038/s41598-021-90075-z

N/A

0DataRank · unranked

0 citations

Andrew J. Annalora, Marija Jozic, Daniel J. Elson, Lu Wang, Theo K. Bammler +7 more

Placental transcriptomic signatures of spontaneous preterm birth

American Journal of Obstetrics and Gynecology(2022)10.1016/j.ajog.2022.07.015

N/A

0DataRank · unranked

58 citations

James W. MacDonald, Theo K. Bammler, Drew B. Day, Christine T. Loftus, Erin Buth +9 more

Prenatal exposure to particulate matter and placental gene expression

Environment International(2022)10.1016/j.envint.2022.107310

N/A

0DataRank · unranked

41 citations

James W. MacDonald, Michael Hussey, Theo K. Bammler, Christine T. Loftus, Alison G. Paquette +10 more

Serum Protein Exposure Activates a Core Regulatory Program Driving Human Proximal Tubule Injury

Journal of the American Society of Nephrology(2022)10.1681/asn.2021060751

N/A

0DataRank · unranked

25 citations

Selvaraj Muthusamy, Mohamed Adil, Anish Mahadeo, Jade Yang, Ranita S. Patel +8 more

Prolonged, Low-Level Exposure to the Marine Toxin, Domoic Acid, and Measures of Neurotoxicity in Nonhuman Primates

Environmental Health Perspectives(2022)10.1289/ehp10923

N/A

0DataRank · unranked

19 citations

Christopher Williams, Jian‐Liang Li, James W. MacDonald, Theo K. Bammler, Todd L. Richards +11 more

Symptomatic and asymptomatic domoic acid exposure in zebrafish (Danio rerio) revealed distinct non-overlapping gene expression patterns in the brain

Aquatic Toxicology(2022)10.1016/j.aquatox.2022.106310

N/A

0DataRank · unranked

4 citations

Kathi A. Lefebvre, James W. MacDonald, Theo K. Bammler, Neelakanteswar Aluru, Alia S. Hidayat

An optimized proteomics-based approach to estimate blood contamination and cellular heterogeneity of frozen placental tissue

Placenta(2022)10.1016/j.placenta.2022.12.007

N/A

0DataRank · unranked

4 citations

Guihua Yue, Alison G. Paquette, Sheela Sathyanarayana, Daniel A. Enquobahrie, Theo K. Bammler +4 more

Placental transcriptomic signatures of prenatal exposure to Hydroxy-Polycyclic aromatic hydrocarbons

Environment International(2023)10.1016/j.envint.2023.107763

N/A

0DataRank · unranked

36 citations

Samantha Lapehn, Sophia L Freije, James W. MacDonald, Theo K. Bammler, Drew B. Day +9 more

Mono(2-ethylhexyl) phthalate induces transcriptomic changes in placental cells based on concentration, fetal sex, and trophoblast cell type

Archives of Toxicology(2023)10.1007/s00204-023-03444-0

N/A

0DataRank · unranked

21 citations

Scott Houghtaling, Kylia Ahuna, Leena Kadam, James W. MacDonald, Theo K. Bammler +5 more

Characterization of Xenobiotic and Steroid Disposition Potential of Human Placental Tissue and Cell Lines (BeWo, JEG-3, JAR, and HTR-8/SVneo) by Quantitative Proteomics

Drug Metabolism and Disposition(2023)10.1124/dmd.123.001345

N/A

0DataRank · unranked

11 citations

Samantha Lapehn, Alison G. Paquette, Dilip Kumar Singh, James W. MacDonald, Theo K. Bammler +6 more

Identification of prognostic biomarkers for antibiotic associated nephrotoxicity in cystic fibrosis

Journal of Cystic Fibrosis(2023)10.1016/j.jcf.2023.10.021

N/A

0DataRank · unranked

4 citations

Francine Cesar, Leila R. Zelnick, Nicholas G. O’Connor, Zoie A. Bailey, J.L. Lo +11 more

Associations of prenatal exposure to NO2 and near roadway residence with placental gene expression

Placenta(2023)10.1016/j.placenta.2023.05.004

N/A

0DataRank · unranked

2 citations

Daniel A. Enquobahrie, Christine T. Loftus, James W. MacDonald, Theo K. Bammler, Alison G. Paquette +10 more

Glucocerebrosidase deficiency leads to neuropathology via cellular immune activation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.13.571406

N/A

0DataRank · unranked

1 citations

Ruth E. Thomas, Gillian Milstein, Gautam Pareek, Theo K. Bammler, James W. MacDonald +2 more

Mouse sarcopenia model reveals sex- and age-specific differences in phenotypic and molecular characteristics

Journal of Clinical Investigation(2024)10.1172/jci172890

N/A

0DataRank · unranked

45 citations

Kora Krumm, Bárbara Anderson, Anthony Christiani, Lena Strait, Theresa Li +12 more

Challenges and Opportunities for the Clinical Translation of Spatial Transcriptomics Technologies

Glomerular Diseases(2024)10.1159/000538344

N/A

0DataRank · unranked

44 citations

David K. Prince, James W. MacDonald, Theo K. Bammler, Shreeram Akilesh, Kelly D. Smith

Placental transcriptomic signatures of prenatal and preconceptional maternal stress

Molecular Psychiatry(2024)10.1038/s41380-023-02403-6

N/A

0DataRank · unranked

19 citations

Sophia L Freije, James W. MacDonald, Theo K. Bammler, Ciara Benson, Kecia N. Carroll +8 more

Transcriptome-wide association study and Mendelian randomization in pancreatic cancer identifies susceptibility genes and causal relationships with type 2 diabetes and venous thromboembolism

EBioMedicine(2024)10.1016/j.ebiom.2024.105233

N/A

0DataRank · unranked

14 citations

Chelsea A. Isom, Yangzi Liu, David-Alexandre Trégouët, Sara Lindström, Lu Wang +52 more

Human enteroid monolayers: A novel, functionally stable model for investigating oral drug disposition

Drug Metabolism and Disposition(2024)10.1124/dmd.124.001551

N/A

0DataRank · unranked

13 citations

Eimear T O'Mahony, James W. MacDonald, Theo K. Bammler, Mark Donowitz, Edward J. Kelly +2 more

Associations Between Prenatal Vitamin D and Placental Gene Expression

Journal of Nutrition(2024)10.1016/j.tjnut.2024.10.019

N/A

0DataRank · unranked

9 citations

Melissa M. Melough, Samantha Lapehn, James W. MacDonald, Theo K. Bammler, Evan J. Firsick +10 more

Cystic fibrosis-related diabetes is associated with reduced islet protein expression of GLP-1 receptor and perturbation of cell-specific transcriptional programs

Scientific Reports(2024)10.1038/s41598-024-76722-1

N/A

0DataRank · unranked

8 citations

Rachna Vemireddy, Joseph Castillo, Brendy S Fountaine, Theo K. Bammler, James W. MacDonald +3 more

Glucocerebrosidase deficiency leads to neuropathology via cellular immune activation

PLoS Genetics(2024)10.1371/journal.pgen.1011105

N/A

0DataRank · unranked

6 citations

Ruth E. Thomas, Gillian Milstein, Gautam Pareek, Theo K. Bammler, James W. MacDonald +2 more

Associations Between Prenatal Vitamin D and Placental Gene Expression

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.10.593571

N/A

0DataRank · unranked

1 citations

Melissa M. Melough, Samantha Lapehn, James W. MacDonald, Theo K. Bammler, Evan J. Firsick +10 more

Mitochondrial Calcium Signaling Regulates Branched-Chain Amino Acid Catabolism in Fibrolamellar Carcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.27.596106

N/A

0DataRank · unranked

1 citations

Melissa J. S. MacEwen, Jane Chea, Heidi L. Kenerson, Albert A. Kwong, Timothy M. Locke +13 more

Your Blood is Out for Delivery: Considerations of Shipping Time and Temperature on Degradation of RNA from Stabilized Whole Blood

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.24.609519

N/A

0DataRank · unranked

0 citations

Lauren G. Brown, James I. MacDonald, Theo K. Bammler, Darawan Rinchai, Serena Nguyen +8 more

Associations of maternal blood biomarkers of prenatal APAP exposure with placental gene expression and child attention deficit hyperactivity disorder

Nature Mental Health(2025)10.1038/s44220-025-00387-6

N/A

0DataRank · unranked

9 citations

Theo K. Bammler, Emily S. Barrett, Nicole R. Bush, Brent R. Collett, Karen J. Derefinko +11 more

An assessment of organophosphate ester mixtures and the placental transcriptome

Environment International(2025)10.1016/j.envint.2025.109402

N/A

0DataRank · unranked

7 citations

Mariana Parenti, Evan J. Firsick, Dennis Khodasevich, Brennan H. Baker, Drew B. Day +14 more

Mitochondrial calcium signaling regulates branched-chain amino acid catabolism in fibrolamellar carcinoma

Science Advances(2025)10.1126/sciadv.adu9512

N/A

0DataRank · unranked

6 citations

Melissa J. S. MacEwen, Jane Chea, Heidi L. Kenerson, Albert A. Kwong, Timothy M. Locke +13 more

Rigor and Reproducibility of Spatial Transcriptomics Performed on Clinically Sourced Human Tissues

Laboratory Investigation(2025)10.1016/j.labinv.2025.104190

N/A

0DataRank · unranked

4 citations

James W. MacDonald, Xianwu Li, Emily Beirne, Galen Stewart, Theo K. Bammler +2 more

Associations of placental lncRNA expression with maternal pre-pregnancy BMI and infant birthweight in two birth cohorts

Journal of Developmental Origins of Health and Disease(2025)10.1017/s204017442500011x

N/A

0DataRank · unranked

1 citations

James W. MacDonald, Theo K. Bammler, Fasil Tekola‐Ayele, Kathleen F. Kerr, Alison G. Paquette +7 more

A Flexible and Responsive Remote Study Design to Assess Gene Expression Changes During Wildfire Smoke Exposure with homeRNA, an At-home Blood Sampling Kit

medRxiv(2025)10.1101/2025.10.11.25337783

N/A

0DataRank · unranked

4 citations

Lauren G. Brown, Yuting Zeng, Taushif Khan, Ingrid H Robertson, Dakota S. Kennedy +16 more

Butyrate rescues chlorpyrifos-induced social deficits through inhibition of class I histone deacetylases

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.19.683261

N/A

0DataRank · unranked

3 citations

Ally Xinyi Kong, Ping Zhang, Jinhua Chi, Khoa Pham, M. S. Johnson +9 more

Placental Gene Expression Associated With Early Childhood Growth Trajectories and Obesity Risk

Obesity(2025)10.1002/oby.70000

N/A

0DataRank · unranked

0 citations

Luhang Han, Alison G. Paquette, James W. MacDonald, Theo K. Bammler, Christine T. Loftus +7 more

The Placental Transcriptome Serves as a Mechanistic Link between Prenatal Phthalate Exposure and Placental Efficiency

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.05.664214

N/A

0DataRank · unranked

0 citations

Samantha Lapehn, James W. MacDonald, Theo K. Bammler, Adam A. Szpiro, Marnie F. Hazlehurst +9 more

Evaluation of toxicological mechanisms of ochratoxin-A in human primary proximal tubule epithelial cells

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.29.673189

N/A

0DataRank · unranked

0 citations

Theo K. Bammler, James W. MacDonald, Angela Zheng, Catherine K. Yeung, Jonathan Himmelfarb +2 more

From Home to Transcriptome: Comparing the transcriptomic profile of induced immune response via lipopolysaccharide stimulation in homeRNA and venous blood

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.27.678977

N/A

0DataRank · unranked

0 citations

Xiaofu Wei, Laura A. Milton, M Yunos Alizai, James W. MacDonald, Theo K. Bammler +9 more

Pervasive food contaminant ochratoxin‐A induces energy crisis: Mitochondrial dysfunction in human primary proximal tubule cells

Toxicology Reports(2025)10.1016/j.toxrep.2025.102169

N/A

0DataRank · unranked

0 citations

Theo K. Bammler, James W. MacDonald, Angela Zheng, Catherine K. Yeung, Jonathan Himmelfarb +2 more

The placental transcriptome serves as a mechanistic link between prenatal phthalate exposure and placental efficiency

Environment International(2025)10.1016/j.envint.2025.109949

N/A

0DataRank · unranked

0 citations

Samantha Lapehn, James W. MacDonald, Theo K. Bammler, Adam A. Szpiro, Marnie F. Hazlehurst +9 more

SS‐31 and NMN: Two paths to improve metabolism and function in aged hearts

Aging Cell(2020)10.1111/acel.13213

N/A

0DataRank · unranked

61 citations

Alessandro Bitto, Huiliang Zhang, Mariya T. Sweetwyne, Rene Coig, Saakshi Bhayana +9 more

Placental proteomic signatures of preterm birth, gestational age, and birthweight

BMC Pregnancy and Childbirth(2025)10.1186/s12884-025-08558-0

N/A

0DataRank · unranked

0 citations

Laken Kruger, Bhagwat Prasad, James W. MacDonald, Theo K. Bammler, Chaini Konwar +7 more

Impact of Microbiome on Hepatic Metabolizing Enzymes and Transporters in Mice during Pregnancy

Drug Metabolism and Disposition(2020)10.1124/dmd.120.000039

N/A

0DataRank · unranked

13 citations

Lu Wang, Yuanyuan Shi, Joseph L. Dempsey, Olesya Pershutkina, Moumita Dutta +4 more

Short Report: Circulating microRNAs are associated with incident diabetes over 10 years in Japanese Americans

Scientific Reports(2020)10.1038/s41598-020-63606-3

N/A

0DataRank · unranked

14 citations

Daniel A. Enquobahrie, Theo K. Bammler, Sengkeo Srinouanprachanh, James W. MacDonald, Steven E. Kahn +4 more

Evolution of Natural Lifespan Variation and Molecular Strategies of Extended Lifespan

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.09.374488

N/A

0DataRank · unranked

1 citations

Cheryl Zi Jin Phua, Mitchell Lee, Lu Wang, Alexander Tyshkovskiy, Siming Ma +11 more

A Comprehensive Assessment of Associations between Prenatal Phthalate Exposure and the Placental Transcriptomic Landscape

Environmental Health Perspectives(2021)10.1289/ehp8973

N/A

0DataRank · unranked

50 citations

James W. MacDonald, Samantha Lapehn, Theo K. Bammler, Laken Kruger, Drew B. Day +13 more

Spiny mice activate unique transcriptional programs after severe kidney injury regenerating organ function without fibrosis

iScience(2021)10.1016/j.isci.2021.103269

N/A

0DataRank · unranked

50 citations

Chris M. Brewer, Paul Wakenight, Nadia M. Bahrami, Kristina G. Bernardi, Amy Tran +14 more

Neonatal Exposure to BPA, BDE-99, and PCB Produces Persistent Changes in Hepatic Transcriptome Associated With Gut Dysbiosis in Adult Mouse Livers

Toxicological Sciences(2021)10.1093/toxsci/kfab104

N/A

0DataRank · unranked

23 citations

Moumita Dutta, Joseph L. Dempsey, Hans‐Joachim Lehmler, James W. MacDonald, Theo K. Bammler +6 more

Persistence of improved glucose homeostasis in Gclm null mice with age and cadmium treatment

Redox Biology(2021)10.1016/j.redox.2021.102213

N/A

0DataRank · unranked

17 citations

Dianne Botta, Collin C. White, David Scoville, Sengkeo Srinouanprachanh, Theo K. Bammler +3 more

Theo K. Bammler

Indexed papers

Top data-sharing exemplar

Papers